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Information on SUBCLASS 6.2.2
Subclass Accession number: 6839
Subclass: 6.2.2 PSSM
Type: AR beta-beta link
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 23.1 +/- 19.3
Average RMSD (Å) : 0.640 +/- 0.313

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: XpXphXhGhh
(φψ)-conformation: pbaapppgbb
Pattern: [it][AFLT]x[AL]x[DTV][EHS]x[drs][CLPV][npv][ap][G][almv][AITV][akm]
Conservation:-0.274-0.389-0.6450.696-0.293-0.1550.333-0.644-0.835-0.396-0.6270.6283.347-0.3000.096-0.543
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aa6_*_6331aa6   -636651ITRAQVSDRPNKGAIYEEEEEEESSS-TTEEEbbxxbxbaaxxpgbbb
1q16_A_11421q16   A11451160TARAVVSQRVPAGMTMEEEEEEETTS-TTEEEbbbxbxbaaxxpgbbb
1qcs_A_431qcs   A4661IFTLRTHPSVVPGSVAEEEEEE-TTS-TT-EEbbbxbxbaaxxpvbbx
2nap_A_6682nap   A671686ELPARVSDVCRPGLIAEEEEEEESSB-TTEEExbxxbxbaaxxpvbbb
2pth_*_882pth   -88103ILVAHDELDLPPGVAKEEEEEEETTS-TT-EEbbbxbxbaabxpgbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aa6_*_6331aa6   *     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE Y - 651
1qcs_A_431qcs   A     MSESELENOMETHIONINE V - 56
1qcs_A_431qcs   A     MSESELENOMETHIONINE P - 57
1qcs_A_431qcs   A     MSESELENOMETHIONINE G - 58
1qcs_A_431qcs   A     MSESELENOMETHIONINE S - 59
1qcs_A_431qcs   A     MSESELENOMETHIONINE V - 60
2nap_A_6682nap   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE L - 684

Clusters included in this Subclass
CLUSTER: AR.5.111
CLUSTER: AR.7.14