Information on SUBCLASS 2.3.2 |
Subclass Accession number: 69
Subclass: 2.3.2 Type: HA beta-beta hairpin DB: ArchDB-KI |
Number of loops: 4 Average sequence ID (%) : 20.0 +/- 0.9 Average RMSD (Å) : 0.29 +/- 0.06 Consensus geometry
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Consensus Sequence: | XpGXpp |
(φψ)-conformation: | bbeabb |
Pattern: | [ILTV] | {DRY} | {AWY} | [ACFI] | [CGY] | x | [EST] | [G] | {DG} | [HNY] | {NR} | {VY} | [LM] | [IV] | [AIM] |
Conservation: | -0.027 | -1.059 | -0.801 | -0.543 | -0.574 | -0.801 | -0.008 | 2.592 | -0.764 | 0.937 | -0.450 | -0.598 | 0.990 | 1.118 | -0.013 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a06_*_81 | 1a06 | - | 81 | 95 | LDDIYESGGHLYLIM | EEEEEE-SSEEEEEE | babbbbbeabbbxxx |
1bx4_A_122 | 1bx4 | A | 122 | 136 | TCAACITGDNRSLIA | EEEEEEETTEEEEEE | bbxbxxbeabbbbbx |
1cki_A_71 | 1cki | A | 71 | 85 | IRWCGAEGDYNVMVM | EEEEEEETTEEEEEE | xabbebbeabxbbbb |
2csn_*_71 | 2csn | - | 71 | 85 | VYYFGQEGLHNVLVI | EEEEEEETTEEEEEE | babbbbbeabbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bx4_A_122 | 1bx4 | A | ADNADENOSINE | C - 123 |
1bx4_A_122 | 1bx4 | A | MO4MAGNESIUM ION, 4 WATERS COORDINATED | T - 128 |
1bx4_A_122 | 1bx4 | A | MO4MAGNESIUM ION, 4 WATERS COORDINATED | D - 130 |
1bx4_A_122 | 1bx4 | A | MO4MAGNESIUM ION, 4 WATERS COORDINATED | N - 131 |
1bx4_A_122 | 1bx4 | A | ADNADENOSINE | L - 134 |
1bx4_A_122 | 1bx4 | A | ADNADENOSINE | A - 136 |
2csn_*_71 | 2csn | * | CKIN-(2-AMINOETHYL)-5-CHLOROISOQUINOLINE-8-SULFONAMIDE | I - 85 |
2csn_*_71 | 2csn | * | CKIN-(2-AMINOETHYL)-5-CHLOROISOQUINOLINE-8-SULFONAMIDE | D - 86 |
Bibliographic annotations |
Clusters included in this Subclass |
CLUSTER: HA.1.0 |
CLUSTER: HA.2.11 |