Information on SUBCLASS 10.2.1 |
Subclass Accession number: 6905
Subclass: 10.2.1 Type: AR beta-beta link DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 83.5 +/- 2.2 Average RMSD (Å) : 0.640 +/- 0.391 Consensus geometry
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Consensus Sequence: | YTNHTVhPEALERW |
(φψ)-conformation: | bbpabapaaappbb |
Pattern: | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x |
Conservation: | -0.940 | -0.335 | 0.994 | 0.108 | 0.551 | 1.437 | 0.108 | -0.988 | -0.962 | -0.914 | 0.108 | -0.335 | -0.335 | 0.108 | -0.545 | 2.766 | -0.830 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1em6_A_371 | 1em6 | A | 372 | 388 | FAYTNHTVLPEALERWP | EEEE----SGGG--EEE | xbbbxabaxaaaxxbxx |
1h5u_A_371 | 1h5u | A | 372 | 388 | CAYTNHTVIPEALERWP | EEEE-----GGGS-EEE | xbbbxabaxaaaxxbxp |
1l5r_A_371 | 1l5r | A | 372 | 388 | FAYTNHTVLPEALERWP | EEEE-----GGG--EEE | xbbbxabaxaaaxxbxx |
1l5w_A_340 | 1l5w | A | 340 | 356 | FAYTNHTLMPEALERWD | EEEE----SGGGS-EEE | xbbbxabaxaaabxbbx |
1ygp_A_371 | 1ygp | A | 372 | 388 | FAYTNHTVMQEALEKWP | EEEEE---SGGGS-EEE | xbbxbaxaxaaaxxbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1em6_A_371 | 1em6 | A | NBG1-N-ACETYL-BETA-D-GLUCOSAMINE | T - 375 |
1em6_A_371 | 1em6 | A | NBG1-N-ACETYL-BETA-D-GLUCOSAMINE | N - 376 |
1em6_A_371 | 1em6 | A | NBG1-N-ACETYL-BETA-D-GLUCOSAMINE | H - 377 |
1em6_A_371 | 1em6 | A | NBG1-N-ACETYL-BETA-D-GLUCOSAMINE | T - 378 |
1em6_A_371 | 1em6 | A | NBG1-N-ACETYL-BETA-D-GLUCOSAMINE | V - 379 |
1em6_A_371 | 1em6 | A | NBG1-N-ACETYL-BETA-D-GLUCOSAMINE | L - 380 |
1em6_A_371 | 1em6 | A | NBG1-N-ACETYL-BETA-D-GLUCOSAMINE | A - 383 |
1h5u_A_371 | 1h5u | A | GLCGLUCOSE | T - 375 |
1h5u_A_371 | 1h5u | A | GLCGLUCOSE | N - 376 |
1h5u_A_371 | 1h5u | A | GLCGLUCOSE | H - 377 |
1h5u_A_371 | 1h5u | A | GLCGLUCOSE | T - 378 |
1l5r_A_371 | 1l5r | A | RBFRIBOFLAVINE | L - 380 |
1l5r_A_371 | 1l5r | A | RBFRIBOFLAVINE | E - 382 |
1l5w_A_340 | 1l5w | A | GLCGLUCOSE | H - 345 |
1l5w_A_340 | 1l5w | A | PO4PHOSPHATE ION | H - 345 |
1l5w_A_340 | 1l5w | A | GLCGLUCOSE | T - 346 |
1l5w_A_340 | 1l5w | A | GLCGLUCOSE | M - 348 |
1l5w_A_340 | 1l5w | A | GLCGLUCOSE | P - 349 |
1l5w_A_340 | 1l5w | A | GLCGLUCOSE | E - 350 |
1l5w_A_340 | 1l5w | A | GLCGLUCOSE | A - 351 |
1l5w_A_340 | 1l5w | A | GLCGLUCOSE | E - 353 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h5u_A_371 | 1h5u | A | GLCGLC BINDING SITE FOR CHAIN A | H - 377 |
Clusters included in this Subclass |
CLUSTER: AR.9.5 |