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Information on SUBCLASS 5.40.1
Subclass Accession number: 7502
Subclass: 5.40.1 PSSM
Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 24.0 +/- 29.9
Average RMSD (Å) : 0.667 +/- 0.208

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: hchGpXpXp
(φψ)-conformation: bbaabbbaa
Pattern: [AT][IL][ITV][FLY][DN][AIV][G][NST][ALT][ST][IK][ENS][KS][VY][AE][AT][FM][ILM]x[ADS][GL][KR][NS][AE][AN]
Conservation:0.1120.641-0.3210.0541.262-0.4153.147-0.134-1.0710.521-1.261-0.3210.1120.282-0.4420.1120.5460.241-1.633-0.790-1.5251.0750.811-0.297-0.707
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ekq_A_611ekq   A6185ALVLNIGTLSKESVEAMIIAGKSANEEEEE-TT--HHHHHHHHHHHHHHHbbbbbaabpbaaaaaaaaaaaaaaa
1gik_A_31gik   A327TITFDAGNATINKYATFMESLRNEAEEEEESSS--HHHHHHHHHHHHHHHxxbbbaabbbaaaaaaaaaaaaaaa
1qci_A_31qci   A327TIIYNVGSTTISKYATFLNDLRNEAEEEEESSS--HHHHHHHHHHHHHHHbxbbxaabbbaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ekq_A_611ekq   A     CSWCYSTEINE-S-DIOXIDE V - 63
1ekq_A_611ekq   A     CSWCYSTEINE-S-DIOXIDE N - 65
1ekq_A_611ekq   A     CSWCYSTEINE-S-DIOXIDE G - 67
1gik_A_31gik   A     NAGN-ACETYL-D-GLUCOSAMINE D - 7
1gik_A_31gik   A     NAGN-ACETYL-D-GLUCOSAMINE N - 10
1gik_A_31gik   A     NAGN-ACETYL-D-GLUCOSAMINE K - 15

Clusters included in this Subclass
CLUSTER: EH.6.83