ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 11.5.1

Subclass Accession number: 7664
Subclass: 11.5.1

Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 3

Average sequence ID (%) : 55.6 +/- 6.1
Average RMSD (Å) : 0.267 +/- 0.115

Consensus geometry

d (Å): 19

delta (°): 45-90

theta (°): 135-180

rho (°): 270-315

Consensus Sequence:	pphHShDYpGPYXGh
(φψ)-conformation:	bbaaalllbewapea

Pattern:	x	[KR]	[EQ]	[LM]	[H]	[S]	[WY]	[D]	[Y]	[NS]	[G]	[P]	[Y]	x	[G]	[FY]	[DR]	[G]	[FV]	[AV]	x	[F]	[AG]	[HR]	[DE]	[LM]	[DV]	x	[GT]	[IL]
Conservation:	-1.151	-0.197	-0.153	-0.311	1.986	0.045	0.807	1.015	1.501	-0.456	1.015	1.501	1.501	-0.892	1.015	0.401	-1.037	1.015	-0.908	-0.925	-1.425	1.015	-0.698	-0.342	-0.068	-0.311	-1.393	-1.053	-1.053	-0.440

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1m1n_A_438	1m1n	A	438	467	FREMHSWDYSGPYHGFDGFAIFARDMDMTL	EEESSSGGG----SHHHHHHHHHHHHHHHH	bbxaaavlvbewaxeaaaaaaaaaaaaaaa
1mio_A_477	1mio	A	478	507	SKQLHSYDYNGPYAGFRGVVNFGHELVNGI	EEETTTTTS----SSSHHHHHHHHHHHHHH	bbbaaavllbewabeaaaaaaaaaaaaaaa
1qgu_A_436	1qgu	A	436	465	FRQMHSWDYSGPYHGYDGFAIFARDMDMTL	EEESSSGGG----SHHHHHHHHHHHHHHHH	bbxaaavlvFewaxeaaaaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1m1n_A_438	1m1n	A	CACALCIUM ION	E - 440
1m1n_A_438	1m1n	A	HCA3-HYDROXY-3-CARBOXY-ADIPIC ACID	E - 440
1m1n_A_438	1m1n	A	CFNFE(7)-MO-S(9)-N CLUSTER	M - 441
1m1n_A_438	1m1n	A	CACALCIUM ION	H - 442
1m1n_A_438	1m1n	A	HCA3-HYDROXY-3-CARBOXY-ADIPIC ACID	H - 442
1m1n_A_438	1m1n	A	CFNFE(7)-MO-S(9)-N CLUSTER	H - 442
1m1n_A_438	1m1n	A	CACALCIUM ION	S - 443
1m1n_A_438	1m1n	A	HCA3-HYDROXY-3-CARBOXY-ADIPIC ACID	S - 443
1m1n_A_438	1m1n	A	CFNFE(7)-MO-S(9)-N CLUSTER	S - 443
1mio_A_477	1mio	A	CACALCIUM ION	Q - 480
1mio_A_477	1mio	A	HCA3-HYDROXY-3-CARBOXY-ADIPIC ACID	Q - 480
1mio_A_477	1mio	A	CFMFE-MO-S CLUSTER	L - 481
1mio_A_477	1mio	A	CACALCIUM ION	H - 482
1mio_A_477	1mio	A	HCA3-HYDROXY-3-CARBOXY-ADIPIC ACID	H - 482
1mio_A_477	1mio	A	CFMFE-MO-S CLUSTER	H - 482
1mio_A_477	1mio	A	CACALCIUM ION	S - 483
1mio_A_477	1mio	A	HCA3-HYDROXY-3-CARBOXY-ADIPIC ACID	S - 483
1mio_A_477	1mio	A	CFMFE-MO-S CLUSTER	S - 483
1qgu_A_436	1qgu	A	EDO1,2-ETHANEDIOL	R - 437
1qgu_A_436	1qgu	A	HCA3-HYDROXY-3-CARBOXY-ADIPIC ACID	Q - 438
1qgu_A_436	1qgu	A	CFMFE-MO-S CLUSTER	M - 439
1qgu_A_436	1qgu	A	HCA3-HYDROXY-3-CARBOXY-ADIPIC ACID	H - 440
1qgu_A_436	1qgu	A	CFMFE-MO-S CLUSTER	H - 440
1qgu_A_436	1qgu	A	HCA3-HYDROXY-3-CARBOXY-ADIPIC ACID	S - 441
1qgu_A_436	1qgu	A	CFMFE-MO-S CLUSTER	S - 441
1qgu_A_436	1qgu	A	EDO1,2-ETHANEDIOL	W - 442
1qgu_A_436	1qgu	A	EDO1,2-ETHANEDIOL	D - 443
1qgu_A_436	1qgu	A	EDO1,2-ETHANEDIOL	Y - 444
1qgu_A_436	1qgu	A	EDO1,2-ETHANEDIOL	S - 445
1qgu_A_436	1qgu	A	EDO1,2-ETHANEDIOL	R - 459
1qgu_A_436	1qgu	A	EDO1,2-ETHANEDIOL	D - 460
1qgu_A_436	1qgu	A	EDO1,2-ETHANEDIOL	M - 463

Clusters included in this Subclass