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Information on SUBCLASS 6.9.1
Subclass Accession number: 773
Subclass: 6.9.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1 (>75 %)  
 Number of loops: 9

Average sequence ID (%) : 15.2 +/- 15.9
Average RMSD (Å) : 1.189 +/- 0.496

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 225-270
Consensus Sequence: XXGXXpchXh
(φψ)-conformation: bbepaabpbb
Pattern: xxx[gw][dkprs][adpst][DHST][ADGKNS][agpq]xx
Conservation:-0.805-0.818-0.8412.349-0.339-0.3370.9920.2180.733-0.586-0.565
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a9x_B_18371a9x   B18381848QGIHRTDKPAFEEEEESSSSEEabbbxaabxbb
1di2_A_1301di2   A135145QESGPPHKREFEEES-GGG-EEbbbexaabxbb
1ds1_A_2211ds1   A221230.LYGDADDPFL.EES-TTS-EE.bbepaabxxb
1f8e_A_2361f8e   A241251FTDGSATGPAEEEEE-SSS-EEbbbepaabpbb
1gzq_A_351gzq   A3747IHGWDSDSGTAEEEEETTTTEEabbbxaaxpbx
1h2c_A_1201h2c   A123133THFGKATNPLVEEES-TTS-EEbxbexaabxbb
1j1l_A_2011j1l   A201211VYIGPDDAQQKEEES-TTS-EEbbbexaabxbx
1nsc_A_1871nsc   A191201GVDGPDSNALIEEES-GGG-EEbbbexaabxbx
1spp_B_561spp   B6070VFDGLLSGPSYEESSSTTS-EEbbxexaaxpxa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a9x_B_18371a9x   B     CYG2-AMINO-4-(AMINO-3-OXO-PROPYLSULFANYLCARBONYL)-BUTYRIC ACID S - 1849
1a9x_B_18371a9x   B     CYG2-AMINO-4-(AMINO-3-OXO-PROPYLSULFANYLCARBONYL)-BUTYRIC ACID F - 1850
1gzq_A_351gzq   A     PII2-[(HYDROXY{[(2R,3R,5S,6R)-2,3,4,5,6-PENTAHYDROXYCYCLOHEXYL]OXY}PHOSPHORYL)OXY]-1-[(PALMITOYLOXY)METHYL]ETHYL HEPTADECANOATE H - 38
1gzq_A_351gzq   A     TWTDOCOSANE H - 38
1gzq_A_351gzq   A     TWTDOCOSANE G - 39
1gzq_A_351gzq   A     TWTDOCOSANE W - 40
1gzq_A_351gzq   A     PII2-[(HYDROXY{[(2R,3R,5S,6R)-2,3,4,5,6-PENTAHYDROXYCYCLOHEXYL]OXY}PHOSPHORYL)OXY]-1-[(PALMITOYLOXY)METHYL]ETHYL HEPTADECANOATE A - 47
1gzq_A_351gzq   A     TWTDOCOSANE A - 47
1gzq_A_351gzq   A     TWTDOCOSANE I - 48
1gzq_A_351gzq   A     PII2-[(HYDROXY{[(2R,3R,5S,6R)-2,3,4,5,6-PENTAHYDROXYCYCLOHEXYL]OXY}PHOSPHORYL)OXY]-1-[(PALMITOYLOXY)METHYL]ETHYL HEPTADECANOATE F - 49
1gzq_A_351gzq   A     TWTDOCOSANE F - 49
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gzq_A_351gzq   A AC6TWT BINDING SITE FOR CHAIN AW - 40

Clusters included in this Subclass
CLUSTER: HA.5.57
CLUSTER: HA.6.58
CLUSTER: HA.7.28