Information on SUBCLASS 2.2.35 |
Subclass Accession number: 7769
Subclass: 2.2.35 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 2 Average sequence ID (%) : 5.9 +/- 0.0 Average RMSD (Å) : 0.700 +/- 0.000 Consensus geometry
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Consensus Sequence: | pXXpGX |
(φψ)-conformation: | bbaaep |
Pattern: | [EH] | [TV] | [AF] | [AT] | [MV] | [QW] | [RS] | [TV] | x | [DH] | [G] | x | [FI] | [CL] | x | [GT] | [CD] |
Conservation: | 0.746 | -0.099 | -0.733 | -0.099 | 0.323 | 0.535 | -0.522 | -0.099 | -1.367 | 0.535 | 3.071 | -1.156 | 0.112 | 0.323 | -0.945 | -0.522 | -0.099 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cmv_A_64 | 1cmv | A | 71 | 87 | HVAAMQSVRDGLFCLGC | EEEEEEE-SSEEEEEEE | bxabbbxxaaexxbbbb |
1gk9_B_114 | 1gk9 | B | 114 | 130 | ETFTVWRTVHGNILQTD | EEEEEEEETTEEEEEEE | bbbbbbbbaaexxabbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gk9_B_114 | 1gk9 | B | EDO1,2-ETHANEDIOL | L - 127 |
1gk9_B_114 | 1gk9 | B | EDO1,2-ETHANEDIOL | Q - 128 |
Clusters included in this Subclass |
CLUSTER: HA.2.99 |