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Information on SUBCLASS 6.16.1
Subclass Accession number: 781
Subclass: 6.16.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 1 (>50 %)  3.4 (>50 %)  3.4.21 (>50 %)  3.4.21.5
SCOP : 50493 (>50 %)  50494 (>50 %)  50514 (>50 %)  
 Number of loops: 4

Average sequence ID (%) : 13.5 +/- 13.9
Average RMSD (Å) : 0.900 +/- 0.337

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: phGpphcXpX
(φψ)-conformation: bbeppgapbb
Pattern: x[AEGT]xx[CKLV][G][KQT][DERS][GP][DNS]xxxx[AIVY][FILY]
Conservation:-0.337-0.603-0.732-0.435-0.6893.1900.053-0.1721.0550.818-0.344-0.818-0.473-0.430-0.3010.216
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1c39_A_341c39   A3449FESTVGQSPDMYSYVFEEEEE--TT--EEEEEbbbbbebpwaxbbxbb
1dp7_P_551dp7   P5570RTRRLGTRGNSKYHYYEEEEESSTT--EEEEEbbbbbexpvaxbxbxx
1ntv_A_1251ntv   A126141FGYVCGKEGNHRFVAIEEEEESSTT--EEEEEbbbxbexpvaxbbbbb
7taa_*_3937taa   -394409IAMRKGTDGSQIVTILEEEEESSTTS-EEEEEbbbbbeppgaxxbbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1c39_A_341c39   A     P3M1-3 SUGAR RING OF PENTAMANNOSYL 6-PHOSPHATE P - 42
1c39_A_341c39   A     P3M1-3 SUGAR RING OF PENTAMANNOSYL 6-PHOSPHATE D - 43
1c39_A_341c39   A     P3M1-3 SUGAR RING OF PENTAMANNOSYL 6-PHOSPHATE M - 44
1c39_A_341c39   A     P3M1-3 SUGAR RING OF PENTAMANNOSYL 6-PHOSPHATE Y - 45
1c39_A_341c39   A     P3M1-3 SUGAR RING OF PENTAMANNOSYL 6-PHOSPHATE Y - 47
1dp7_P_551dp7   P     PEGDI(HYDROXYETHYL)ETHER R - 55
1dp7_P_551dp7   P     EDO1,2-ETHANEDIOL T - 56
1dp7_P_551dp7   P     PEGDI(HYDROXYETHYL)ETHER T - 56
1dp7_P_551dp7   P     EDO1,2-ETHANEDIOL R - 57
1dp7_P_551dp7   P     EDO1,2-ETHANEDIOL R - 58
1dp7_P_551dp7   P     EDO1,2-ETHANEDIOL Y - 67
1ntv_A_1251ntv   A     PO4PHOSPHATE ION K - 142

Clusters included in this Subclass
CLUSTER: HA.5.86