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Information on SUBCLASS 5.27.1
Subclass Accession number: 7965
Subclass: 5.27.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 40.0 +/- 31.3
Average RMSD (Å) : 1.133 +/- 0.416

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XXhpcXGhp
(φψ)-conformation: bpppgeebb
Pattern: [HV][KR][HV][TY][K][IV][AR][NPT][AL][DT][GN][GS][G][FY][SY]
Conservation:-0.9300.479-0.839-0.5211.5020.478-0.704-1.002-0.886-0.3620.139-0.1812.1851.321-0.680
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1coy_*_2481coy   -248262HRVTKVAPATGSGYSEEEEEEEE-SSSSEEbxxabbbpxxgeebx
1lkk_A_1751lkk   A178192VKHYKIRNLDNGGFYEEEEEEEE-TTS-EEbbbbxxxxxpveebb
1qcf_A_1961qcf   A199213VKHYKIRTLDNGGFYEEEEEEEE-TTS-EEbbbbxbxxxxveebb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1coy_*_2481coy   *     FADFLAVIN-ADENINE DINUCLEOTIDE H - 248
1coy_*_2481coy   *     FADFLAVIN-ADENINE DINUCLEOTIDE R - 249
1coy_*_2481coy   *     FADFLAVIN-ADENINE DINUCLEOTIDE V - 250
1coy_*_2481coy   *     FADFLAVIN-ADENINE DINUCLEOTIDE T - 251
1lkk_A_1751lkk   A     PHSPHOSPHONO GROUP H - 180
1lkk_A_1751lkk   A     PHSPHOSPHONO GROUP K - 182
1qcf_A_1961qcf   A     PTRO-PHOSPHOTYROSINE H - 201
1qcf_A_1961qcf   A     PTRO-PHOSPHOTYROSINE Y - 202
1qcf_A_1961qcf   A     PTRO-PHOSPHOTYROSINE K - 203

Clusters included in this Subclass
CLUSTER: HA.4.138