Information on SUBCLASS 5.27.1 |
Subclass Accession number: 7965
Subclass: 5.27.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 40.0 +/- 31.3 Average RMSD (Å) : 1.133 +/- 0.416 Consensus geometry
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Consensus Sequence: | XXhpcXGhp |
(φψ)-conformation: | bpppgeebb |
Pattern: | [HV] | [KR] | [HV] | [TY] | [K] | [IV] | [AR] | [NPT] | [AL] | [DT] | [GN] | [GS] | [G] | [FY] | [SY] |
Conservation: | -0.930 | 0.479 | -0.839 | -0.521 | 1.502 | 0.478 | -0.704 | -1.002 | -0.886 | -0.362 | 0.139 | -0.181 | 2.185 | 1.321 | -0.680 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1coy_*_248 | 1coy | - | 248 | 262 | HRVTKVAPATGSGYS | EEEEEEEE-SSSSEE | bxxabbbpxxgeebx |
1lkk_A_175 | 1lkk | A | 178 | 192 | VKHYKIRNLDNGGFY | EEEEEEEE-TTS-EE | bbbbxxxxxpveebb |
1qcf_A_196 | 1qcf | A | 199 | 213 | VKHYKIRTLDNGGFY | EEEEEEEE-TTS-EE | bbbbxbxxxxveebb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1coy_*_248 | 1coy | * | FADFLAVIN-ADENINE DINUCLEOTIDE | H - 248 |
1coy_*_248 | 1coy | * | FADFLAVIN-ADENINE DINUCLEOTIDE | R - 249 |
1coy_*_248 | 1coy | * | FADFLAVIN-ADENINE DINUCLEOTIDE | V - 250 |
1coy_*_248 | 1coy | * | FADFLAVIN-ADENINE DINUCLEOTIDE | T - 251 |
1lkk_A_175 | 1lkk | A | PHSPHOSPHONO GROUP | H - 180 |
1lkk_A_175 | 1lkk | A | PHSPHOSPHONO GROUP | K - 182 |
1qcf_A_196 | 1qcf | A | PTRO-PHOSPHOTYROSINE | H - 201 |
1qcf_A_196 | 1qcf | A | PTRO-PHOSPHOTYROSINE | Y - 202 |
1qcf_A_196 | 1qcf | A | PTRO-PHOSPHOTYROSINE | K - 203 |
Clusters included in this Subclass |
CLUSTER: HA.4.138 |