Information on SUBCLASS 6.3.2 |
Subclass Accession number: 7971
Subclass: 6.3.2 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 8.3 +/- 12.9 Average RMSD (Å) : 0.875 +/- 0.096 Consensus geometry
|
Consensus Sequence: | hcXXcXchXX |
(φψ)-conformation: | bbaabappbb |
Pattern: | x | x | x | [DNT] | x | [SW] | [DGK] | x | [GKV] | x | x | [ILT] |
Conservation: | -1.000 | -1.000 | -0.910 | 1.314 | -1.052 | 1.672 | 0.506 | -0.839 | -0.504 | -0.839 | -0.129 | 0.781 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cv8_*_135 | 1cv8 | - | 138 | 149 | IIWNPWDNGFMT | EEE-TT-SS-EE | xbbxaababbbb |
1fwx_A_412 | 1fwx | A | 415 | 426 | QLIDISGDKMVL | EEEE-SSSS-EE | xxbxaababxbx |
1h5z_A_428 | 1h5z | A | 428 | 437 | ..NDHSKMVVQL | ..EE-SSSS-EE | ..xbaabaxxbx |
1qsm_A_69 | 1qsm | A | 77 | 88 | NHMTTWDFKDKI | EE--TT-SS-EE | xbxbaabaxxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1cv8_*_135 | 1cv8 | * | E64N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE | W - 143 |
1qsm_A_69 | 1qsm | A | ACOACETYL COENZYME *A | I - 90 |
1qsm_A_69 | 1qsm | A | ACOACETYL COENZYME *A | N - 91 |
1qsm_A_69 | 1qsm | A | ACOACETYL COENZYME *A | D - 92 |
1qsm_A_69 | 1qsm | A | ACOACETYL COENZYME *A | L - 93 |
1qsm_A_69 | 1qsm | A | ACOACETYL COENZYME *A | Y - 94 |
1qsm_A_69 | 1qsm | A | ACOACETYL COENZYME *A | V - 95 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1cv8_*_135 | 1cv8 | * | NULCATALYTIC TRIAD. | N - 141 |
Clusters included in this Subclass |
CLUSTER: HA.7.19 |