Information on SUBCLASS 7.13.1 |
Subclass Accession number: 8004
Subclass: 7.13.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 33.3 +/- 26.2 Average RMSD (Å) : 0.233 +/- 0.058 Consensus geometry
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Consensus Sequence: | hphcpRXXphA |
(φψ)-conformation: | bbabapababb |
Pattern: | [AG] | x | [FL] | [FLY] | [HR] | [ACI] | [DN] | [EQS] | [R] | x | [HW] | [RT] | [IL] | [A] | [IV] | [AQ] |
Conservation: | -0.222 | -2.017 | -0.235 | -0.300 | 0.362 | -1.063 | 0.743 | -0.586 | 1.989 | -0.759 | 1.191 | -0.536 | 0.289 | 1.130 | 0.710 | -0.695 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1kw3_B_37 | 1kw3 | B | 37 | 52 | AALYRADQRAWRIAVQ | EEEEESSSBS-SEEEE | bxbbbabaxababbbb |
1lgt_A_181 | 1lgt | A | 185 | 200 | AYFLHCNERHHTLAIA | EEEEESSSBS-SEEEE | bbbbbabaxababbbb |
1lgt_A_38 | 1lgt | A | 38 | 53 | GDLFRIDSRAWRIAVQ | EEEEESSSBS-SEEEE | exbbbabaxababbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1lgt_A_181 | 1lgt | A | BP32'-CHLORO-BIPHENYL-2,3-DIOL | A - 185 |
1lgt_A_181 | 1lgt | A | FE2FE (II) ION | F - 187 |
1lgt_A_181 | 1lgt | A | BP32'-CHLORO-BIPHENYL-2,3-DIOL | F - 187 |
1lgt_A_181 | 1lgt | A | FE2FE (II) ION | H - 189 |
1lgt_A_181 | 1lgt | A | FE2FE (II) ION | H - 195 |
1lgt_A_181 | 1lgt | A | BP32'-CHLORO-BIPHENYL-2,3-DIOL | H - 195 |
Clusters included in this Subclass |
CLUSTER: HA.6.79 |