Information on SUBCLASS 7.5.1 |
Subclass Accession number: 807
Subclass: 7.5.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.1 (>75 %) 3.1.3 (>75 %) GO : GO:0005489 (>75 %) GO:0005507 (>75 %) GO:0016788 (>75 %) GO:0016791 (>75 %) GO:0042578 (>75 %) GO:0046914 (>75 %) SCOP : 49502 (>75 %) 49503 (>75 %) 49504 (>75 %) |
Number of loops: 10 Average sequence ID (%) : 20.4 +/- 21.5 Average RMSD (Å) : 0.600 +/- 0.258 Consensus geometry
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Consensus Sequence: | hXhXGXpphXX |
(φψ)-conformation: | bbppgbabpbb |
Pattern: | x | [fgkltv] | x | [aglmpv] | x | [G] | [dgqs] | [DEKNST] | [DEKNQT] | x | [aitv] | x |
Conservation: | -0.456 | -0.637 | -0.387 | -0.541 | -0.155 | 3.018 | 0.059 | 0.177 | 0.164 | -0.630 | -0.016 | -0.597 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dja_*_244 | 1dja | - | 249 | 260 | FVYPKGQSEPIV | EEE-TT--S-EE | bbbxxgbaxxbx |
1f9z_A_95 | 1f9z | A | 100 | 111 | AGPVKGGTTVIA | EEE-TTS--EEE | pepxpvbaxxbb |
1hyo_A_298 | 1hyo | A | 302 | 313 | SLKGEGMSQAAT | EEE-TT-SS-EE | bbbxpgxabxxx |
1kqf_A_112 | 1kqf | A | 112 | 123 | EYRAPGSDKWQR | EEE-TT-SS-EE | bbbxpvxabxbx |
1lml_*_521 | 1lml | - | 523 | 534 | SVQVHGSNDYTN | EEE-TT-SS-EE | bbbxxvbabxbp |
1m7v_A_168 | 1m7v | A | 169 | 180 | IFRMRGDEQPVW | EEEETT-SS-EE | bbbxxgxabxbb |
1rwi_A_130 | 1rwi | A | 132 | 143 | VKLAAGSKTQTV | EEE-TT-SS-EE | bbbxpvxabxbx |
1rwi_A_214 | 1rwi | A | 216 | 227 | VKLLAGSTTSTV | EEE-TT-S--EE | bbbxpvxabxbx |
1rwi_A_88 | 1rwi | A | 90 | 101 | VTLAAGSNNQTV | EEE-TT-S--EE | bbbxxvxabxbb |
1who_*_28 | 1who | - | 32 | 43 | ELREHGSDEWVA | EEE-TT----EE | bbbxpvbabxbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1f9z_A_95 | 1f9z | A | NINICKEL (II) ION | F - 112 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1lml_*_521 | 1lml | * | CA3CARBOHYDRATE BINDING SITE. | N - 534 |
Clusters included in this Subclass |
CLUSTER: HA.6.23 |