Information on SUBCLASS 0.1.15 |
Subclass Accession number: 8077
Subclass: 0.1.15 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 15.1 +/- 14.8 Average RMSD (Å) : 0.433 +/- 0.242 Consensus geometry
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Consensus Sequence: | XcXX |
(φψ)-conformation: | aabb |
Pattern: | [ARS] | x | [aclv] | [ekrs] | [AENQS] | x | [CVY] | [kp] | [DHN] | x | x | [ILV] | x | [AFIVY] | x |
Conservation: | 0.430 | -0.724 | -0.273 | -0.168 | 0.200 | -0.925 | 1.348 | 0.582 | 1.703 | -1.209 | -0.865 | 1.840 | -1.005 | -0.157 | -0.778 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1h7n_A_269 | 1h7n | A | 273 | 287 | RDASEICKDLPICAY | HHHHHHTTTS-EEEE | aaaaaaaaabpbbxb |
1jbw_A_391 | 1jbw | A | 396 | 410 | AASLNDVPDQPIVIT | HHHHHH-TTS-EEEE | aaaaaaaaabxbbbb |
1kam_A_85 | 1kam | A | 90 | 104 | SLLKQRYPNDQLFFI | HHHHHHSTTSEEEEE | aaaaaaaaabbxbbx |
1q6o_A_45 | 1q6o | A | 48 | 62 | RDLKALYPHKIVLAD | HHHHHH-TTSEEEEE | aaaaaaaaabxbbxx |
1rbl_M_80 | 1rbl | M | 88 | 102 | RECRSEYGDCYIRVA | HHHHHH-TTSEEEEE | aaaaaaaaabxbbxb |
2dpm_A_244 | 2dpm | A | 244 | 258 | ALVEELYKDFNIHYV | HHHHHHTTTSEEEEE | aaaaaaaaabxxxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1h7n_A_269 | 1h7n | A | SHFLAEVULINIC ACID | Y - 287 |
1h7n_A_269 | 1h7n | A | SHFLAEVULINIC ACID | H - 288 |
1jbw_A_391 | 1jbw | A | ACQDIPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER | T - 410 |
1jbw_A_391 | 1jbw | A | ACQDIPHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER | G - 411 |
1q6o_A_45 | 1q6o | A | MGMAGNESIUM ION | L - 60 |
1q6o_A_45 | 1q6o | A | MGMAGNESIUM ION | D - 62 |
1q6o_A_45 | 1q6o | A | LG6L-GULURONIC ACID 6-PHOSPHATE | D - 62 |
1q6o_A_45 | 1q6o | A | MGMAGNESIUM ION | K - 64 |
1q6o_A_45 | 1q6o | A | LG6L-GULURONIC ACID 6-PHOSPHATE | K - 64 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h7n_A_269 | 1h7n | A | AC1SHF BINDING SITE FOR CHAIN A | Y - 287 |
Clusters included in this Subclass |
CLUSTER: HE.3.167 |
CLUSTER: HE.4.86 |