Information on SUBCLASS 0.1.38 |
Subclass Accession number: 8100
Subclass: 0.1.38 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 66.7 +/- -16.1 Average RMSD (Å) : 0.200 +/- 0.000 Consensus geometry
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Consensus Sequence: | FXGR |
(φψ)-conformation: | aapp |
Pattern: | [TY] | [DE] | [A] | [IV] | [KR] | [E] | [A] | [L] | [IV] | [D] | x | [AG] | [E] | [AE] | [F] | [AS] | [G] | [R] |
Conservation: | -1.233 | -0.090 | 0.098 | -0.246 | -0.243 | 0.786 | 0.098 | 0.098 | -0.234 | 1.474 | -1.807 | -0.892 | 0.786 | -1.426 | 1.474 | -0.898 | 1.474 | 0.786 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1nr6_A_80 | 1nr6 | A | 80 | 97 | YEAVKEALVDLGEEFAGR | HHHHHHHHTTTTTTT-EE | aaaaaaaaaaaaaaaaxx |
1og5_A_80 | 1og5 | A | 80 | 97 | YEAVKEALIDLGEEFSGR | HHHHHHHHTTTTTTT-EE | aaaaaaaaaaaaaaaaxx |
1po5_A_81 | 1po5 | A | 81 | 98 | TDAIREALVDQAEAFSGR | HHHHHHHHTTTTTTT-EE | aaaaaaaaaaaaaaaapx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1nr6_A_80 | 1nr6 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 87 |
1nr6_A_80 | 1nr6 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | R - 97 |
1og5_A_80 | 1og5 | A | HECHEME C | L - 87 |
1og5_A_80 | 1og5 | A | HECHEME C | R - 97 |
1og5_A_80 | 1og5 | A | SWFS-WARFARIN | R - 97 |
1po5_A_81 | 1po5 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | L - 88 |
1po5_A_81 | 1po5 | A | HEMPROTOPORPHYRIN IX CONTAINING FE | R - 98 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1og5_A_80 | 1og5 | A | AC1HEC BINDING SITE FOR CHAIN A | R - 97 |
Clusters included in this Subclass |
CLUSTER: HE.7.103 |