Information on SUBCLASS 7.11.1 |
Subclass Accession number: 814
Subclass: 7.11.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.4 (>75 %) 3.4.21 (>75 %) GO : GO:0004175 (>75 %) GO:0004252 (>75 %) GO:0008233 (>75 %) GO:0008236 (>75 %) GO:0016829 (>50 %) SCOP : 50493 (>75 %) 50494 (>75 %) 50514 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 10.3 +/- 19.4 Average RMSD (Å) : 0.833 +/- 0.153 Consensus geometry
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Consensus Sequence: | pXpXpXXXpXp |
(φψ)-conformation: | bbppaabaabb |
Pattern: | [KQT] | [STV] | [EHK] | [PSV] | [KS] | x | x | [KP] | [DS] | [AEL] | [KQT] | [FY] | x |
Conservation: | -0.151 | -0.313 | 0.255 | -0.801 | 0.651 | -0.476 | -1.288 | 0.996 | 0.944 | -0.963 | -0.151 | 2.259 | -0.963 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
12as_A_56 | 12as | A | 56 | 68 | QVKVKALPDAQFE | EE--SSSTT--EE | xbxxaabaabbbb |
1kre_A_303 | 1kre | A | 303 | 315 | KSHPKSRPDLTFL | EE--SS-TT--EE | pbbxaabaabbbb |
1p35_A_239 | 1p35 | A | 249 | 261 | TTESSWGKSEKYN | EE--SSSSS--EE | bbxxaabaaxpxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1kre_A_303 | 1kre | A | NAGN-ACETYL-D-GLUCOSAMINE | R - 309 |
1kre_A_303 | 1kre | A | NAGN-ACETYL-D-GLUCOSAMINE | D - 311 |
1kre_A_303 | 1kre | A | MANALPHA-D-MANNOSE | D - 311 |
1kre_A_303 | 1kre | A | NAGN-ACETYL-D-GLUCOSAMINE | L - 312 |
Clusters included in this Subclass |
CLUSTER: HA.9.16 |