Logo
Information on SUBCLASS 1.3.17
Subclass Accession number: 8178
Subclass: 1.3.17 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 2

Average sequence ID (%) : 27.3 +/- 0.0
Average RMSD (Å) : 0.500 +/- 0.000

Consensus geometry
d (Å): 11 delta (°): 0-45 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: XHIhG
(φψ)-conformation: aap__
Pattern: x[AS][KV][AL]x[EP][H][I][FG][G][EM]
Conservation:-0.842-0.172-0.731-0.619-0.396-0.1722.2830.497-0.6191.390-0.619
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1e2k_A_1141e2k   A136146DAVLAPHIGGEHHHHGGGEEEEaaaaaaaxxxp
1hyo_A_2181hyo   A218228ISKAHEHIFGMHHHHGGGEEEEaaaaaaaxaeb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1e2k_A_1141e2k   A     TMC1-[4-HYDROXY-5-(HYDROXYMETHYL)BICYCLO[3.1.0]HEX-2-YL]-5-METHYLPYRIMIDINE-2,4(1H,3H)-DIONE Q - 125
1e2k_A_1141e2k   A     TMC1-[4-HYDROXY-5-(HYDROXYMETHYL)BICYCLO[3.1.0]HEX-2-YL]-5-METHYLPYRIMIDINE-2,4(1H,3H)-DIONE M - 128
1e2k_A_1141e2k   A     TMC1-[4-HYDROXY-5-(HYDROXYMETHYL)BICYCLO[3.1.0]HEX-2-YL]-5-METHYLPYRIMIDINE-2,4(1H,3H)-DIONE G - 129
1e2k_A_1141e2k   A     TMC1-[4-HYDROXY-5-(HYDROXYMETHYL)BICYCLO[3.1.0]HEX-2-YL]-5-METHYLPYRIMIDINE-2,4(1H,3H)-DIONE Y - 132
1hyo_A_2181hyo   A     MGMAGNESIUM ION N - 232
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1e2k_A_1141e2k   A AC1TMC BINDING SITE FOR CHAIN AQ - 125
1e2k_A_1141e2k   A AC1TMC BINDING SITE FOR CHAIN AM - 128

Clusters included in this Subclass
CLUSTER: HE.4.201