Information on SUBCLASS 2.4.5 |
Subclass Accession number: 8244
Subclass: 2.4.5 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 9 Average sequence ID (%) : 13.1 +/- 23.8 Average RMSD (Å) : 0.678 +/- 0.179 Consensus geometry
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Consensus Sequence: | pXhXXh |
(φψ)-conformation: | aababb |
Pattern: | [aglp] | [dehkpq] | [cesy] | x | [ADEKNS] | [ikl] | [afiv] | x | x | [aivw] |
Conservation: | -0.381 | 0.232 | -0.882 | 1.375 | 1.835 | -0.211 | 0.492 | -1.115 | -1.079 | -0.266 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c4k_A_70 | 1c4k | A | 70 | 79 | ADELKKIFHI | HHHHTT--EE | aaaaaaxabb |
1ea5_A_213 | 1ea5 | A | 213 | 222 | PGSRDLFRRA | HHHHTT-SEE | aaaaaababb |
1g8p_A_203 | 1g8p | A | 203 | 212 | PQLLDRFGLS | HHHHTT-SEE | aaaaaaxabb |
1hpg_A_56 | 1hpg | A | 56 | 65 | GHCTNISANW | HHHHTT-SEE | aaaaaababb |
1n5m_A_216 | 1n5m | A | 216 | 225 | LPSRSLFHRA | HHHHTT-SEE | aaaaaababb |
1ptm_A_252 | 1ptm | A | 252 | 261 | PKYLDNADAV | HHHHTT-SEE | aaaaaababb |
1rkd_*_175 | 1rkd | - | 175 | 184 | DELLALVDII | HHHHTT-SEE | aaaaaaxabb |
2sfa_*_34 | 2sfa | - | 34 | 43 | GHCTEIASTW | HHHHTT-SEE | aaaaaababb |
2sga_*_56 | 2sga | - | 56 | 65 | GHCTNISASW | HHHHTT-SEE | aaaaaababb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ptm_A_252 | 1ptm | A | MSESELENOMETHIONINE | D - 259 |
1ptm_A_252 | 1ptm | A | MSESELENOMETHIONINE | A - 260 |
1ptm_A_252 | 1ptm | A | MSESELENOMETHIONINE | V - 261 |
1ptm_A_252 | 1ptm | A | MSESELENOMETHIONINE | L - 262 |
Clusters included in this Subclass |
CLUSTER: HE.4.110 |
CLUSTER: HE.5.66 |