Information on SUBCLASS 3.2.12 |
Subclass Accession number: 8316
Subclass: 3.2.12 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 25.5 +/- 19.9 Average RMSD (Å) : 0.900 +/- 0.346 Consensus geometry
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Consensus Sequence: | ApGXXph |
(φψ)-conformation: | aalpabb |
Pattern: | [IV] | [DV] | [AQR] | [IKL] | [AFI] | [AK] | [A] | [HNR] | [G] | [IK] | [GKV] | [RY] | [FL] | [GV] | [ITV] | [AGI] | [GQT] |
Conservation: | 1.084 | -0.322 | -0.404 | -0.779 | -0.704 | 0.058 | 1.394 | 0.270 | 2.742 | -0.579 | -1.228 | 0.352 | 0.327 | -0.322 | -0.030 | -1.004 | -0.854 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b31_A_6 | 1b31 | A | 6 | 22 | IDAKFKAHGKKYLGTIG | HHHHHHTTT-SEEEEEE | aaaaaaaavxabbbbbb |
1i1w_A_6 | 1i1w | A | 6 | 22 | VDQLIKARGKVYFGVAT | HHHHHHTTT-SEEEEEE | aaaaaaaavxabbbbxb |
3pmg_A_66 | 3pmg | A | 73 | 89 | IVRIAAANGIGRLVIGQ | HHHHHHHTT--EEEEEE | aaaaaaaavxabbbbxp |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1i1w_A_6 | 1i1w | A | GOLGLYCEROL | V - 6 |
1i1w_A_6 | 1i1w | A | GOLGLYCEROL | D - 7 |
1i1w_A_6 | 1i1w | A | GOLGLYCEROL | Q - 8 |
1i1w_A_6 | 1i1w | A | GOLGLYCEROL | K - 11 |
1i1w_A_6 | 1i1w | A | GOLGLYCEROL | R - 13 |
1i1w_A_6 | 1i1w | A | GOLGLYCEROL | F - 18 |
Clusters included in this Subclass |
CLUSTER: HE.4.285 |