ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 3.3.8

Subclass Accession number: 8325
Subclass: 3.3.8

Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 2

Average sequence ID (%) : 11.5 +/- 0.0
Average RMSD (Å) : 0.800 +/- 0.000

Consensus geometry

d (Å): 11

delta (°): 45-90

theta (°): 135-180

rho (°): 180-225

Consensus Sequence:	ppYXphp
(φψ)-conformation:	aapaabb

Pattern:	[QT]	x	[ES]	[HI]	[L]	[LW]	[AR]	[EF]	[IT]	[IV]	[NR]	[DS]	[HV]	[A]	[EK]	[KT]	[Y]	[DP]	[DH]	[FV]	[DE]	[IL]	[AI]	[DH]	[IM]	[SY]
Conservation:	-0.502	-1.318	-0.298	-0.910	1.130	0.110	-0.706	-1.114	-0.706	0.722	0.110	-0.094	-0.910	1.130	0.314	-0.502	3.579	0.110	0.314	-0.502	0.926	0.314	-0.910	0.314	0.110	-0.706

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1cnz_A_200	1cnz	A	200	225	QSSILWREIVNDVAKTYPDVELAHMY	HHHHHHHHHHHHHHTT-TTSEEEEEE	aaaaaaaaaaaaaaaabaabxbbbbx
1j98_A_50	1j98	A	55	80	TLEHLLAFTIRSHAEKYDHFDIIDIS	HHHHHHHHHHHHHHTT-SSEEEEEEE	aaaaaaaaaaaaaaaaxaabbxabbb

PDB ligands within a cut-off distance of 6 Å in this subclass

Clusters included in this Subclass