Logo
Information on SUBCLASS 3.7.7
Subclass Accession number: 8355
Subclass: 3.7.7 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
EC : 4.4 (>50 %)  4.4.1 (>50 %)  
GO : GO:0016846 (>50 %)  
 Number of loops: 3

Average sequence ID (%) : 9.8 +/- 15.0
Average RMSD (Å) : 0.900 +/- 0.100

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: XXXXXXX
(φψ)-conformation: aapplbb
Pattern: [KLM]x[ERY][AKL][IL][ANS][HQW][ALY]x[AS]x[KP][ADS][LT]x[EKL][LVY]
Conservation:-0.069-1.352-0.454-0.9671.9520.1880.445-0.711-0.5821.470-0.5541.941-0.0690.508-0.967-0.8390.060
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1jf9_A_2991jf9   A310326MHYALSQLESVPDLTLYHHHHHHHHTTSTTEEEEaaaaaaaaaaxxlxbbb
1omz_A_771omz   A8096LLRLLNHYQAVPSLHKVHHHHHHHHTTSTTEEEEaaaaaaaaaaxxvxabb
1qip_A_841qip   A84100KDEKIAWALSRKATLELHHHHHHHHTTSSSEEEEaaaaaaaaaaxxlbbbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1omz_A_771omz   A     UD2URIDINE-DIPHOSPHATE-N-ACETYLGALACTOSAMINE V - 99
1qip_A_841qip   A     GNBS-P-NITROBENZYLOXYCARBONYLGLUTATHIONE K - 84
1qip_A_841qip   A     SEO2-MERCAPTOETHANOL K - 84
1qip_A_841qip   A     GNBS-P-NITROBENZYLOXYCARBONYLGLUTATHIONE K - 87
1qip_A_841qip   A     GNBS-P-NITROBENZYLOXYCARBONYLGLUTATHIONE I - 88
1qip_A_841qip   A     SEO2-MERCAPTOETHANOL I - 88
1qip_A_841qip   A     GNBS-P-NITROBENZYLOXYCARBONYLGLUTATHIONE A - 89
1qip_A_841qip   A     GNBS-P-NITROBENZYLOXYCARBONYLGLUTATHIONE A - 91
1qip_A_841qip   A     ZNOZINC ION, 2 WATERS COORDINATED L - 92
1qip_A_841qip   A     GNBS-P-NITROBENZYLOXYCARBONYLGLUTATHIONE L - 92
1qip_A_841qip   A     ZNOZINC ION, 2 WATERS COORDINATED E - 99
1qip_A_841qip   A     GNBS-P-NITROBENZYLOXYCARBONYLGLUTATHIONE E - 99
1qip_A_841qip   A     ZNOZINC ION, 2 WATERS COORDINATED T - 101
1qip_A_841qip   A     GNBS-P-NITROBENZYLOXYCARBONYLGLUTATHIONE T - 101
1qip_A_841qip   A     GNBS-P-NITROBENZYLOXYCARBONYLGLUTATHIONE N - 103
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1qip_A_841qip   A HD2HYDROPHOBIC SUBSTRATE BINDING POCKET AT DIMER INTERFACE.I - 88
1qip_A_841qip   A HD2HYDROPHOBIC SUBSTRATE BINDING POCKET AT DIMER INTERFACE.L - 92
1qip_A_841qip   A ZN1ZINC BINDING SITE AT DIMER INTERFACE.E - 99
1qip_A_841qip   A GH1BINDING SITE FOR GSH MOIETY - SUBSTRATE BINDING SITE IS FORMED BY ZN2 HYD2 AND GSH2.N - 103

Clusters included in this Subclass
CLUSTER: HE.4.251