Information on SUBCLASS 4.2.8 |
Subclass Accession number: 8424
Subclass: 4.2.8 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 9.7 +/- 12.1 Average RMSD (Å) : 0.725 +/- 0.206 Consensus geometry
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Consensus Sequence: | hXGXhcpX |
(φψ)-conformation: | aalababb |
Pattern: | x | [ADEK] | x | x | x | [AKR] | [DG] | x | [CFVY] | [DKN] | [AEQS] | x |
Conservation: | -0.871 | -0.036 | -0.034 | -0.936 | -1.193 | 0.342 | 2.395 | -0.550 | 0.092 | 1.169 | 0.221 | -0.600 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1aj6_*_34 | 1aj6 | - | 48 | 59 | IDEALAGHCKEI | HHHHHTTS--EE | aaaaaavababb |
1gvh_A_329 | 1gvh | A | 329 | 340 | EADRAKGQFDSE | HHHHHHT--SEE | aaaaaalababb |
1o98_A_376 | 1o98 | A | 384 | 395 | LKEIEADKYDAI | HHHHHTT--SEE | aaaaaalababb |
2ts1_*_2 | 2ts1 | - | 5 | 16 | AELQWRGLVNQT | HHHHHHT--SEE | aaaaaavababb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1aj6_*_34 | 1aj6 | * | NOVNOVOBIOCIN | V - 43 |
1aj6_*_34 | 1aj6 | * | NOVNOVOBIOCIN | D - 45 |
1aj6_*_34 | 1aj6 | * | NOVNOVOBIOCIN | N - 46 |
1aj6_*_34 | 1aj6 | * | NOVNOVOBIOCIN | A - 47 |
1aj6_*_34 | 1aj6 | * | NOVNOVOBIOCIN | D - 49 |
1aj6_*_34 | 1aj6 | * | NOVNOVOBIOCIN | E - 50 |
1o98_A_376 | 1o98 | A | MNMANGANESE (II) ION | N - 398 |
Clusters included in this Subclass |
CLUSTER: HE.5.180 |