Information on SUBCLASS 10.1.1 |
Subclass Accession number: 844
Subclass: 10.1.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.4 (>75 %) 3.4 (>75 %) 3.4.21 (>75 %) 3.4.21 (>75 %) 3.4.21.43.4.21.43.4.22 (>75 %) GO : GO:0004175 (>75 %) GO:0004175 (>75 %) GO:0004197 (>75 %) GO:0004252 (>50 %) GO:0004252 (>75 %) GO:0005509 (>75 %) GO:0008233 (>75 %) GO:0008233 (>75 %) GO:0008234 (>75 %) GO:0008236 (>50 %) GO:0008236 (>75 %) SCOP : 50493 (>75 %) 50493 (>75 %) 50494 (>75 %) 50494 (>75 %) 50514 (>75 %) 50514 (>75 %) 54000 (>75 %) 54001 (>75 %) 54002 (>75 %) |
Number of loops: 8 Average sequence ID (%) : 48.3 +/- 25.9 Average RMSD (Å) : 0.200 +/- 0.053 Consensus geometry
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Consensus Sequence: | pNSWcpXXGpcGhh |
(φψ)-conformation: | pbaaeaapeplgbb |
Pattern: | [KRY] | [IWY] | x | [IV] | [AEKR] | [N] | [S] | [W] | [GNT] | [AEKT] | [DEGPQ] | [HSW] | [G] | [ehkm] | [DEGKNR] | [G] | [FLWY] | [FILVY] | [ckr] | [IM] | [akltv] |
Conservation: | -0.389 | 0.386 | -0.743 | 0.271 | -0.547 | 1.195 | 0.431 | 3.103 | -0.303 | -0.729 | -0.746 | -0.094 | 1.195 | -0.803 | -0.780 | 1.195 | -0.082 | -0.547 | -0.924 | -0.055 | -1.034 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cs8_A_180 | 1cs8 | A | 182 | 202 | YWLVKNSWGEEWGMGGYVKMA | EEEEE-SB-TTSTBTTEEEEE | bbxbxbaaeaaxexvvbbxbp |
1deu_A_193 | 1deu | A | 195 | 215 | YWIVRNSWGEPWGERGWLRIV | EEEEE-SB-TTSTBTTEEEEE | bxxbxbaaeaaxexlvbbbbp |
1k3b_C_397 | 1k3b | C | 398 | 418 | YWIVKNSWGTGWGENGYFRIR | EEEEE-SS-TTSTBTTEEEEE | bbbbxxaaeaabexlvbbbbp |
1khq_A_170 | 1khq | A | 170 | 190 | YILIKNSWGTGWGENGYIRIK | EEEEE-SB-TTSTBTTEEEEE | bbxbxbaaeaaxexlgbbbbp |
1me4_A_170 | 1me4 | A | 170 | 190 | YWIIKNSWTTQWGEEGYIRIA | EEEEE-SB-TTSTBTTEEEEE | bxbbxbaaeaaxexlvbbbbx |
1the_A_212 | 1the | A | 214 | 234 | YWLVANSWNADWGDNGFFKIL | EEEEE-SB-TTSTBTTEEEEE | bxxbxxaaeaaxeblvxbbbp |
2cb5_A_389 | 2cb5 | A | 391 | 411 | KWRVENSWGEDHGHKGYLCMT | EEEEE-SB-TTSTBTTEEEEE | bbxbxxaaeaaxexlvbbbbx |
3gcb_*_385 | 3gcb | - | 387 | 407 | RYRVENSWGKDSGKDGLYVMT | EEEEE-SB-TTSTBTTEEEEE | bbxbxxaaeaaxeblvbbbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1me4_A_170 | 1me4 | A | T10[1-(1-BENZYL-3-HYDROXY-2-OXO-PROPYLCARBAMOYL)-2-PHENYL -ETHYL]-CARBAMIC ACID BENZYL ESTER | W - 177 |
1the_A_212 | 1the | A | SEM3-AMINO-4-OXYBENZYL-2-BUTANONE | W - 221 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
3gcb_*_385 | 3gcb | * | NULCATALYTIC RESIDUES. | N - 392 |
Clusters included in this Subclass |
CLUSTER: HA.10.0 |