|
|
|
|
|
|
|
| Information on SUBCLASS 4.18.3 |
|
Subclass Accession number: 8474
Subclass: 4.18.3 
Type: HE alpha-beta DB: ArchDB-EC Image coordinates: 
 Consensus coordinates:
Conserved Annotation EC : 3.2 (>75 %) 3.2.1 (>75 %) 3.2.1.21 GO : GO:0004553 (>75 %) GO:0015926 (>50 %) GO:0016798 (>75 %) SCOP : 51445 (>75 %) 51521 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 47.8 +/- 7.3 Average RMSD (Å) : 0.300 +/- 0.100 Consensus geometry
|
| Consensus Sequence: | pYXNPXhY |
| (φψ)-conformation: | aallppbb |
| Pattern: | [EKQ] | [G] | [IL] | [RY] | [DKS] | [LV] | [LM] | x | [Y] | [FTV] | [AK] | [DN] | [HK] | [Y] | x | [N] | [P] | [LTV] | [IL] | [Y] | [IV] | [T] | [E] |
| Conservation: | -0.485 | 1.082 | -0.265 | -0.540 | -0.991 | -0.479 | -0.192 | -1.699 | 1.537 | -1.193 | -0.757 | -0.010 | -0.464 | 1.537 | -1.193 | 1.082 | 1.537 | -0.991 | -0.265 | 1.537 | -0.045 | 0.627 | 0.627 |
| Loops included in this Subclass |
| Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
| 1cbg_*_375 | 1cbg | - | 375 | 397 | QGIRKLLLYVKNHYNNPVIYITE | HHHHHHHHHHHHHTT---EEEEE | aaaaaaaaaaaaaallxxbbxab |
| 1e4m_M_387 | 1e4m | M | 387 | 409 | KGIYSVMDYFKNKYYNPLIYVTE | HHHHHHHHHHHHHTTS--EEEEE | aaaaaaaaaaaaaavlxxbbxab |
| 1qox_A_333 | 1qox | A | 333 | 355 | EGLYDLLRYTADKYGNPTLYITE | HHHHHHHHHHHHHTTS--EEEEE | aaaaaaaaaaaaaavlxxbbxab |
| PDB ligands within a cut-off distance of 6 Å in this subclass |
| Loop | PDB | Chain | Ligands | Residue |
| 1e4m_M_387 | 1e4m | M | NAGN-ACETYL-D-GLUCOSAMINE | K - 399 |
| 1e4m_M_387 | 1e4m | M | NAGN-ACETYL-D-GLUCOSAMINE | Y - 401 |
| 1e4m_M_387 | 1e4m | M | GOLGLYCEROL | E - 409 |
| PDB Site Annotated loops in this subclass |
| Loop | PDB | Chain | Site | Residue |
| 1qox_A_333 | 1qox | A | CAAACTIVE SITE (CHAIN A) | E - 355 |
| Clusters included in this Subclass |
| CLUSTER: HE.4.305 |
| For any comment or web-related incidence, send an email to the webmaster. |
|