Information on SUBCLASS 4.20.4 |
Subclass Accession number: 8480
Subclass: 4.20.4 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0005524 (>75 %) GO:0016301 (>50 %) GO:0016772 (>50 %) GO:0016776 (>50 %) GO:0019205 (>50 %) GO:0030554 (>75 %) SCOP : 52539 (>50 %) 52540 (>50 %) 52541 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 13.3 +/- 20.0 Average RMSD (Å) : 0.833 +/- 0.351 Consensus geometry
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Consensus Sequence: | XXXpXphX |
(φψ)-conformation: | aabppabb |
Pattern: | x | [EKS] | [EF] | [AE] | x | [ADK] | [HI] | x | [EQ] | [PSV] | [DKT] | [AFL] | x | [IL] | [FIY] |
Conservation: | -0.521 | 0.298 | 0.177 | 0.598 | -0.385 | -0.755 | -0.222 | -1.340 | 2.283 | -0.989 | -0.404 | -0.638 | -0.638 | 1.655 | 0.883 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1oi7_A_56 | 1oi7 | A | 56 | 70 | VKEAVAHHEVDASII | HHHHHHHS--SEEEE | aaaaaaabxbabbbb |
1ukz_*_109 | 1ukz | - | 113 | 127 | ISFERDIVESKFILF | HHHHHHT---SEEEE | aaaaaaabxxabbbb |
3adk_*_99 | 3adk | - | 103 | 117 | EEFERKIGQPTLLLY | HHHHHHT---SEEEE | aaaaaaabxxabbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ukz_*_109 | 1ukz | * | AMPADENOSINE MONOPHOSPHATE | Q - 111 |
Clusters included in this Subclass |
CLUSTER: HE.4.324 |