Information on SUBCLASS 5.1.4 |
Subclass Accession number: 8551
Subclass: 5.1.4 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 16.7 +/- 15.0 Average RMSD (Å) : 0.800 +/- 0.082 Consensus geometry
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Consensus Sequence: | XphpXGphh |
(φψ)-conformation: | aapbpgpbb |
Pattern: | x | [ADQS] | x | [AMY] | x | x | [AILT] | [AL] | [PQS] | [DERY] | [ILV] | [KQS] | [EP] | [G] | [DQT] | x | [CILV] | [FILV] | x |
Conservation: | -0.949 | -0.400 | -0.812 | -0.472 | -1.223 | -0.628 | -0.491 | 0.382 | 0.215 | -0.674 | 0.831 | 0.395 | 0.933 | 3.307 | 0.002 | -0.009 | 0.149 | 0.195 | -0.752 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bg6_*_88 | 1bg6 | - | 89 | 107 | ASIAANIASYISEGQLIIL | HHHHHHHGGG--TT-EEEE | aaaaaaaaaaxbpgxbbbx |
1jbq_A_348 | 1jbq | A | 354 | 372 | VAVAVKAAQELQEGQRCVV | HHHHHHHGGG--TT-EEEE | aaaaaaaaaaxbpgxbbbb |
1qgu_A_382 | 1qgu | A | 382 | 400 | NDDYDRTLPDLKEGTLLFD | HHHHHHHGGG--TT-EEEE | aaaaaaaaaabxpvxxbbb |
4uag_A_390 | 4uag | A | 391 | 409 | EQAMRLLAPRVQPGDMVLL | HHHHHHHGGG--TT-EEEE | aaaaaaaaaaxbpvxbbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1jbq_A_348 | 1jbq | A | PLPPYRIDOXAL-5'-PHOSPHATE | S - 349 |
1jbq_A_348 | 1jbq | A | PLPPYRIDOXAL-5'-PHOSPHATE | A - 350 |
Clusters included in this Subclass |
CLUSTER: HE.7.146 |
CLUSTER: HE.9.42 |