Information on SUBCLASS 5.2.6 |
Subclass Accession number: 8559
Subclass: 5.2.6 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 56.9 +/- 6.3 Average RMSD (Å) : 0.233 +/- 0.058 Consensus geometry
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Consensus Sequence: | XGhPcDhph |
(φψ)-conformation: | aappaappb |
Pattern: | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x |
Conservation: | -0.709 | -0.179 | -1.239 | 1.145 | -0.709 | 1.675 | -0.842 | 1.145 | 0.880 | -0.974 | -0.709 | -0.709 | 1.145 | 0.616 | -0.577 | 1.145 | -1.106 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1alq_*_221 | 1alq | - | 221 | 237 | IKDGVPKDYKVADKSGQ | HHHHS-TT-EEEEEEEE | aaaaxxaabxbbbbxbb |
1bsg_*_221 | 1bsg | - | 221 | 237 | FRAGLPDDWTLGDKTGA | HHHHS-TTSEEEEEEEE | aaaaxpaaxxbbbbbbb |
1ghp_A_221 | 1ghp | A | 221 | 237 | IKDGVPKDYKVADKSGQ | HHHHS-TTSEEEEEEEE | aaaaxxaaxxbbbbxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bsg_*_221 | 1bsg | * | ACTACETATE ION | W - 229 |
1ghp_A_221 | 1ghp | A | PNMOPEN FORM - PENICILLIN G | K - 234 |
1ghp_A_221 | 1ghp | A | PNMOPEN FORM - PENICILLIN G | S - 235 |
1ghp_A_221 | 1ghp | A | PNMOPEN FORM - PENICILLIN G | G - 236 |
1ghp_A_221 | 1ghp | A | PNMOPEN FORM - PENICILLIN G | Q - 237 |
Clusters included in this Subclass |
CLUSTER: HE.4.321 |