Information on SUBCLASS 5.10.2 |
Subclass Accession number: 8583
Subclass: 5.10.2 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 13.3 +/- 13.6 Average RMSD (Å) : 1.033 +/- 0.404 Consensus geometry
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Consensus Sequence: | XhXXXXXXV |
(φψ)-conformation: | aapaababb |
Pattern: | [NV] | x | x | x | x | [AF] | x | [KP] | x | [STV] | [EMR] | [ACD] | [V] | [GIY] | [ILT] |
Conservation: | -0.157 | -0.671 | -0.900 | -0.327 | 0.131 | 0.313 | -0.671 | 1.365 | -0.671 | 0.016 | -0.213 | -0.213 | 2.881 | -1.129 | 0.246 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1mxs_A_181 | 1mxs | A | 181 | 195 | VRNYMALPNVMCVGT | HHHHHHSTTB--EEE | aaaaaaxaababbbe |
1wsa_A_65 | 1wsa | A | 75 | 89 | VNELLAQKETEAVII | HHHHHHSTT---EEE | aaaaaaxaababbbb |
7aat_A_107 | 7aat | A | 117 | 131 | NFLQRFFKFSRDVYL | HHHHHH-TT--EEEE | aaaaaaxaabaxbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
7aat_A_107 | 7aat | A | PLPPYRIDOXAL-5'-PHOSPHATE | S - 107 |
7aat_A_107 | 7aat | A | PLPPYRIDOXAL-5'-PHOSPHATE | G - 108 |
7aat_A_107 | 7aat | A | PLPPYRIDOXAL-5'-PHOSPHATE | T - 109 |
7aat_A_107 | 7aat | A | PLPPYRIDOXAL-5'-PHOSPHATE | G - 110 |
7aat_A_107 | 7aat | A | PLPPYRIDOXAL-5'-PHOSPHATE | L - 112 |
Clusters included in this Subclass |
CLUSTER: HE.5.343 |