Information on SUBCLASS 5.48.1 |
Subclass Accession number: 8626
Subclass: 5.48.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 46.3 +/- 14.8 Average RMSD (Å) : 0.367 +/- 0.115 Consensus geometry
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Consensus Sequence: | XhpGKLchL |
(φψ)-conformation: | aallbbabb |
Pattern: | [LT] | [AM] | [DNQ] | [ET] | [IV] | [AL] | [HNQ] | x | [CF] | [DH] | [G] | [K] | [L] | [DN] | [IM] | [L] | [V] | [AN] |
Conservation: | -0.880 | -0.803 | -0.594 | -0.654 | 0.443 | -1.029 | -0.429 | -1.586 | -0.197 | 0.073 | 2.299 | 1.555 | 0.811 | 0.459 | -0.144 | 0.811 | 0.811 | -0.945 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ae1_A_82 | 1ae1 | A | 88 | 105 | LMQTVAHVFDGKLNILVN | HHHHHHHHTTS---EEEE | aaaaaaaaavvbbabbbx |
1jbq_A_236 | 1jbq | A | 236 | 253 | TADEILQQCDGKLDMLVA | HHHHHHHHHTT---EEEE | aaaaaaaaalvbbabbbb |
2ae2_A_70 | 2ae2 | A | 76 | 93 | LMNTVANHFHGKLNILVN | HHHHHHHHTTT---EEEE | aaaaaaaaalvbbabbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ae1_A_82 | 1ae1 | A | NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | N - 105 |
1jbq_A_236 | 1jbq | A | PLPPYRIDOXAL-5'-PHOSPHATE | S - 254 |
Clusters included in this Subclass |
CLUSTER: HE.5.229 |