ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 6.1.5

Subclass Accession number: 8636
Subclass: 6.1.5

Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 2.5 (>50 %) 2.5.1 (>50 %) 2.5.1.9
SCOP : 52120 (>50 %) 52121 (>50 %) 52122 (>50 %)

Number of loops: 3

Average sequence ID (%) : 26.4 +/- 18.3
Average RMSD (Å) : 0.333 +/- 0.058

Consensus geometry

d (Å): 11

delta (°): 90-135

theta (°): 135-180

rho (°): 45-90

Consensus Sequence:	pXGhpppcIX
(φψ)-conformation:	aagppaaabb

Pattern:	[DV]	[AGR]	[FL]	[MV]	[EKQ]	[FG]	[AT]	[AI]	[DEK]	[CQR]	[ILM]	[AV]	[DRS]	[HL]	[G]	[GV]	[EKR]	[EQ]	[EN]	[DN]	[I]	x	[ILY]	x
Conservation:	-0.613	-1.017	0.145	0.416	0.270	-0.378	0.028	-0.478	-0.006	-1.017	0.270	-0.037	-1.017	-0.774	3.117	-0.987	0.086	1.125	0.515	1.215	1.464	-1.384	-0.465	-0.480

Loops included in this Subclass

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1gvh_A_365	1gvh	A	FADFLAVIN-ADENINE DINUCLEOTIDE	E - 388

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1gvh_A_365	1gvh	A	AC1FAD BINDING SITE FOR CHAIN A	E - 388

Clusters included in this Subclass