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Information on SUBCLASS 0.1.13
Subclass Accession number: 871
Subclass: 0.1.13 PSSM
Type: EH beta-alpha
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 13

Average sequence ID (%) : 9.8 +/- 13.3
Average RMSD (Å) : 0.646 +/- 0.171

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 45-90 rho (°): 225-270
Consensus Sequence: hXXX
(φψ)-conformation: bbaa
Pattern: x[fgklmv][adepst]x[dgnqrst]x[filpv]xx
Conservation:-1.1710.8161.354-1.290-0.505-0.5391.353-0.2210.203
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1eyq_A_431eyq   A5361YLEDIAVASEEETTHHHHbbpaaaaaa
1f2v_A_541f2v   A5563VFSPDFVSSEE-TTHHHHbbxaaaaaa
1fo8_A_2141fo8   A215223EVAPDFFEYEE-TTHHHHbxxaaaaaa
1fwx_A_2911fwx   A293301VLDVTRFDAEEEGGGHHHbbxaaaaaa
1gvf_A_461gvf   A4856AGTPGTFKHEE-TTHHHHbbxaaaaaa
1hc7_A_2551hc7   A260268GLSWRFIGAEEETHHHHHbbbaaaaaa
1l1l_A_1441l1l   A144151.KAVSMPFS.EETTHHHH.xbaaaaaa
1l6s_A_3071l6s   A308316IFSYFALDLEEETTHHHHbxbaaaaaa
1m55_A_1451m55   A145152.VDSGYIPA.EETTHHHH.bbaaaaaa
1oac_A_681oac   A6977WVSDTFINDEE-TTHHHHbbpaaaaaa
1q14_A_1491q14   A149157VYPPQVFKSEE-THHHHHxbxaaaaaa
1urs_A_881urs   A9199GMPHDNNGVEEEGGGHHHvxxaaaaaa
1vgy_A_3551vgy   A355363NVRLNDIPKEEETTHHHHbbxaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1eyq_A_431eyq   A     SULSULFATE ANION F - 44
1eyq_A_431eyq   A     SULSULFATE ANION I - 45
1eyq_A_431eyq   A     SULSULFATE ANION K - 46
1eyq_A_431eyq   A     NARNARINGENIN F - 47
1eyq_A_431eyq   A     NARNARINGENIN T - 48
1eyq_A_431eyq   A     NARNARINGENIN A - 49
1eyq_A_431eyq   A     NARNARINGENIN I - 50
1fo8_A_2141fo8   A     MMCMETHYL MERCURY ION L - 214
1fo8_A_2141fo8   A     MMCMETHYL MERCURY ION E - 215
1fo8_A_2141fo8   A     MMCMETHYL MERCURY ION V - 216
1fo8_A_2141fo8   A     MMCMETHYL MERCURY ION F - 220
1gvf_A_461gvf   A     EGLETHYLENE GLYCOL I - 46
1gvf_A_461gvf   A     EGLETHYLENE GLYCOL L - 47
1gvf_A_461gvf   A     PGCO-PHOSPHOGLYCOLOHYDROXAMATE T - 50
1l6s_A_3071l6s   A     DSB4,7-DIOXOSEBACIC ACID Y - 311
1m55_A_1451m55   A     ZNZINC ION Y - 153
1q14_A_1491q14   A     ZN2ZINC ION ON 3-FOLD CRYSTAL AXIS Y - 150
1urs_A_881urs   A     MLRMALTOTRIOSE G - 91
1urs_A_881urs   A     MLRMALTOTRIOSE P - 93
1urs_A_881urs   A     MLRMALTOTRIOSE H - 94
1urs_A_881urs   A     MLRMALTOTRIOSE D - 95
1urs_A_881urs   A     MLRMALTOTRIOSE N - 96
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1urs_A_881urs   A AC1MLR BINDING SITE FOR CHAIN AP - 93
1urs_A_881urs   A AC1MLR BINDING SITE FOR CHAIN AD - 95
1urs_A_881urs   A AC1MLR BINDING SITE FOR CHAIN AN - 96

Clusters included in this Subclass
CLUSTER: EH.2.42
CLUSTER: EH.3.28