Information on SUBCLASS 8.13.1 |
Subclass Accession number: 8726
Subclass: 8.13.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 26.7 +/- 18.2 Average RMSD (Å) : 0.467 +/- 0.115 Consensus geometry
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Consensus Sequence: | XhXGhXcIhphX |
(φψ)-conformation: | aapgpplbppba |
Pattern: | [IL] | [HKR] | x | [E] | x | [KR] | [IT] | [LY] | [EK] | x | [LM] | [AQR] | [G] | [CG] | [PTV] | [GN] | [I] | [IP] | [NT] | [ILV] | x | [DWY] | [CFI] | [GV] | [AKQ] |
Conservation: | 0.523 | -0.071 | -1.721 | 1.893 | -1.250 | 0.912 | -0.356 | 0.358 | 0.568 | -0.936 | 0.630 | -0.700 | 2.601 | -0.064 | -0.857 | 0.612 | 1.186 | -0.305 | 0.351 | 0.243 | -1.171 | -0.543 | -0.621 | -0.581 | -0.700 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cki_A_52 | 1cki | A | 52 | 76 | LHIESKIYKMMQGGVGIPTIRWCGA | HHHHHHHHHHSTTSTT---EEEEEE | aaaaaaaaaaapgxxvbxxxabbeb |
1csn_*_52 | 1csn | - | 52 | 76 | LRDEYRTYKLLAGCTGIPNVYYFGQ | HHHHHHHHHHTTT-TT---EEEEEE | aaaaaaaaaaapgxxvbxxbabbbb |
1na7_A_75 | 1na7 | A | 78 | 102 | IKREIKILENLRGGPNIITLADIVK | HHHHHHHHHHSTT-TTB--EEEEEE | aaaaaaaaaaapvxwvxpbxabbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1csn_*_52 | 1csn | * | ATPADENOSINE-5'-TRIPHOSPHATE | E - 55 |
1csn_*_52 | 1csn | * | ATPADENOSINE-5'-TRIPHOSPHATE | Y - 59 |
1csn_*_52 | 1csn | * | ATPADENOSINE-5'-TRIPHOSPHATE | P - 69 |
Clusters included in this Subclass |
CLUSTER: HE.8.95 |