Information on SUBCLASS 8.15.1 |
Subclass Accession number: 8728
Subclass: 8.15.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 27.8 +/- 18.0 Average RMSD (Å) : 0.500 +/- 0.200 Consensus geometry
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Consensus Sequence: | hpccphKXhXHp |
(φψ)-conformation: | aallabpbppbb |
Pattern: | [ADS] | [ITY] | [ALM] | [AET] | [HIL] | [LV] | [ST] | [GN] | [GN] | [KQY] | [VY] | [K] | [AS] | [IP] | x | [H] | [HR] | [GV] |
Conservation: | -0.634 | -0.882 | -0.571 | -0.758 | -0.882 | 0.074 | 0.295 | 0.409 | 0.452 | -0.571 | 0.216 | 1.414 | 0.074 | -0.306 | -0.944 | 3.088 | 0.341 | -0.815 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dcs_*_228 | 1dcs | - | 228 | 245 | AIATLVTGGQVKAPRHHV | HHHHHHTTS-S----EEE | aaaaaaavvabxbxxbbb |
1gp6_A_273 | 1gp6 | A | 273 | 290 | DTLEILSNGKYKSILHRG | HHHHHHTTTSS----EEE | aaaaaaalvaxxbxxbbb |
1odm_A_255 | 1odm | A | 255 | 272 | SYMAHLTNNYYKAPIHRV | HHHHHHTTTSS----EEE | aaaaaaalvabxxxxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gp6_A_273 | 1gp6 | A | DH2(2S,3S)-2-(3,4-DIHYDROXYPHENYL)-3,5,7-TRIHYDROXY-2,3-DIHYDRO-4H-CHROMEN-4-ONE | D - 273 |
1gp6_A_273 | 1gp6 | A | SINSUCCINIC ACID | H - 288 |
1gp6_A_273 | 1gp6 | A | FE2FE (II) ION | H - 288 |
1gp6_A_273 | 1gp6 | A | SINSUCCINIC ACID | R - 289 |
1gp6_A_273 | 1gp6 | A | SINSUCCINIC ACID | G - 290 |
1odm_A_255 | 1odm | A | ASVDELTA-(L-ALPHA-AMINOADIPOYL)-L-CYSTEINYL-D-VINYLGLYCINE | H - 270 |
1odm_A_255 | 1odm | A | FE2FE (II) ION | H - 270 |
1odm_A_255 | 1odm | A | ASVDELTA-(L-ALPHA-AMINOADIPOYL)-L-CYSTEINYL-D-VINYLGLYCINE | V - 272 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gp6_A_273 | 1gp6 | A | IRNIRON BINDING SITE | H - 288 |
1odm_A_255 | 1odm | A | AC3SO4 BINDING SITE FOR CHAIN A | N - 262 |
1odm_A_255 | 1odm | A | AC3SO4 BINDING SITE FOR CHAIN A | N - 263 |
1odm_A_255 | 1odm | A | AC5FE2 BINDING SITE FOR CHAIN A | H - 270 |
Clusters included in this Subclass |
CLUSTER: HE.8.54 |