ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 15.2.1

Subclass Accession number: 8772
Subclass: 15.2.1

Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 5

Average sequence ID (%) : 86.0 +/- -0.3
Average RMSD (Å) : 0.140 +/- 0.055

Consensus geometry

d (Å): 9

delta (°): 45-90

theta (°): 135-180

rho (°): 0-45

Consensus Sequence:	hAALcNpXGVLGVAPShSL
(φψ)-conformation:	aapppbabebbpabaappb

Pattern:	[G]	[T]	[H]	[V]	[A]	[G]	[T]	[IV]	[A]	[A]	[L]	[DN]	[N]	[ST]	[IT]	[G]	[V]	[L]	[G]	[V]	[A]	[P]	[NS]	[AV]	[ES]	[L]	[Y]	[A]	[IV]	[K]
Conservation:	1.028	0.370	2.345	-0.289	-0.289	1.028	0.370	-0.616	-0.289	-0.289	-0.289	-0.618	1.028	-1.112	-1.770	1.028	-0.289	-0.289	1.028	-0.289	-0.289	1.686	-0.997	-1.605	-1.459	-0.289	1.686	-0.289	-0.615	0.370

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1bh6_A_64	1bh6	A	65	94	GTHVAGTVAALDNTTGVLGVAPNVSLYAIK	HHHHHHHHH--SSSSS---SSTTSEEEEEE	aaaaaaaaapxxbabebbxabaaxxxbxbx
1cse_E_64	1cse	E	65	94	GTHVAGTVAALDNTTGVLGVAPSVSLYAVK	HHHHHHHHH---SSSS---SSTTSEEEEEE	aaaaaaaaapxbbabebbxabaaxxbbbbx
1lw6_E_64	1lw6	E	65	94	GTHVAGTVAALNNSIGVLGVAPSASLYAVK	HHHHHHHHH--SSSSS---SSTT-EEEEEE	aaaaaaaaapxxbabebbxabaaxxxbxbx
1mee_A_65	1mee	A	65	94	GTHVAGTIAALNNSIGVLGVAPSASLYAVK	HHHHHHHHH--SSSSS---SSTTSEEEEEE	aaaaaaaaappxbabebbxabaapxxbxbx
1mpt_*_64	1mpt	-	65	94	GTHVAGTIAALNNSIGVLGVAPSAELYAVK	HHHHHHHHH--SSSSS---SSTT-EEEEEE	aaaaaaaaaxpxbabebbxabaaxxxbxbx

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1bh6_A_64	1bh6	A	1BHN-BENZYLOXYCARBONYL-ALA-PRO-3-AMINO-4-PHENYL-BUTAN-2-OL	H - 64
1bh6_A_64	1bh6	A	CACALCIUM ION	A - 74
1bh6_A_64	1bh6	A	CACALCIUM ION	L - 75
1bh6_A_64	1bh6	A	CACALCIUM ION	D - 76
1bh6_A_64	1bh6	A	CACALCIUM ION	N - 77
1bh6_A_64	1bh6	A	CACALCIUM ION	T - 78
1bh6_A_64	1bh6	A	CACALCIUM ION	T - 79
1bh6_A_64	1bh6	A	CACALCIUM ION	G - 80
1bh6_A_64	1bh6	A	CACALCIUM ION	V - 81
1bh6_A_64	1bh6	A	CACALCIUM ION	L - 82
1lw6_E_64	1lw6	E	CACALCIUM ION	N - 76
1lw6_E_64	1lw6	E	CACALCIUM ION	S - 78
1lw6_E_64	1lw6	E	CACALCIUM ION	I - 79

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1bh6_A_64	1bh6	A	ACTACTIVE SITE.	H - 64

Clusters included in this Subclass