Information on SUBCLASS 2.3.9 |
Subclass Accession number: 8943
Subclass: 2.3.9 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 5.0 +/- 8.0 Average RMSD (Å) : 0.600 +/- 0.183 Consensus geometry
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Consensus Sequence: | XXXXXp |
(φψ)-conformation: | aabpaa |
Pattern: | x | x | [DET] | x | x | x | x | x | [DPST] | x | [ENR] | [EFKQ] | [AIKV] | x | x | x | x | x | x | [ELM] |
Conservation: | 0.373 | -1.698 | 2.254 | -0.648 | -0.935 | 0.020 | -0.458 | -0.839 | 0.688 | -0.935 | 2.120 | 0.211 | 0.020 | 0.497 | -0.744 | 0.527 | 0.286 | -1.221 | 0.115 | 0.368 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fgj_A_347 | 1fgj | A | 357 | 376 | VLTCTQCHSERFARSYLDLM | HHHHTTTS-HHHHHHHHHHH | aaaaaaaxxaaaaaaaaaaa |
1i39_A_66 | 1i39 | A | 69 | 88 | LDERMAAKTINEILKECYAE | HHHHTTTS-HHHHHHHHHHH | aaaaaaabxaaaaaaaaaaa |
1luc_B_236 | 1luc | B | 251 | 270 | VRESYSNTDFEQKMGELLSE | HHHH-TTS-HHHHHHHHHHH | aaaaaaabxaaaaaaaaaaa |
1pkl_A_262 | 1pkl | A | 262 | 281 | RGDLGVEIPAEKVVVAQKIL | HHHHTTTS-HHHHHHHHHHH | aaaaaaabwaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1pkl_A_262 | 1pkl | A | DIVDIVALENT CATION BINDING SITE, BY ANALOGY WITH OTHER CRYSTAL STRUCTURES | D - 264 |
Clusters included in this Subclass |
CLUSTER: HH.4.172 |
CLUSTER: HH.6.70 |