ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 2.6.4

Subclass Accession number: 8964
Subclass: 2.6.4

Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Conserved Annotation
EC : 1.15 (>75 %)  1.15.1 (>75 %)  1.15.1.1
GO : GO:0004784 (>75 %)  GO:0016721 (>75 %)
SCOP : 46556 (>75 %)  46609 (>75 %)  46610 (>75 %)

Number of loops: 2

Average sequence ID (%) : 64.0 +/- 0.0
Average RMSD (Å) : 0.200 +/- 0.000

Consensus geometry

d (Å): 13

delta (°): 90-135

theta (°): 135-180

rho (°): 180-225

Consensus Sequence:	XKXDXX
(φψ)-conformation:	aalbaa

Pattern:	[H]	[H]	[AK]	[AT]	[Y]	[V]	[DK]	[G]	[A]	[N]	[DT]	[A]	[LV]	[AD]	[K]	[L]	[AE]	[E]	[A]	[R]	[AD]	[K]	[AE]	[D]	[FH]	[GS]	[A]	[I]	x	[KL]	x	[E]	[K]	[DN]	[L]	[A]	[F]	[N]	[L]	[A]	[G]	[H]	[V]	[N]	[H]	[ST]	[IV]	[FW]	[W]	[K]
Conservation:	1.729	1.729	-1.203	-0.969	1.260	-0.148	-0.969	0.791	-0.148	0.791	-0.969	-0.148	-0.852	-1.321	0.321	-0.148	-1.203	0.321	-0.148	0.321	-1.321	0.321	-1.203	0.791	-0.617	-0.852	-0.148	-0.148	-1.555	-1.438	-1.555	0.321	0.321	-0.382	-0.148	-0.148	0.791	0.791	-0.148	-0.148	0.791	1.729	-0.148	0.791	1.729	-0.734	-0.382	0.204	3.136	0.321

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1bsm_A_31	1bsm	A	31	80	HHKAYVDGANTALDKLAEARDKADFGAINKLEKDLAFNLAGHVNHSVFWK	HHHHHHHHHHHHHHHHHHHHHHT--TTHHHHHHHHHHHHHHHHHHHHHHH	aaaaaaaaaaaaaaaaaaaaaavbaaaaaaaaaaaaaaaaaaaaaaaaaa
1ids_A_32	1ids	A	32	81	HHATYVKGANDAVAKLEEARAKEDHSAILLNEKNLAFNLAGHVNHTIWWK	HHHHHHHHHHHHHHHHHHHHHTT--TTHHHHHHHHHHHHHHHHHHHHHHH	aaaaaaaaaaaaaaaaaaaaaalbaaaaaaaaaaaaaaaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1bsm_A_31	1bsm	A	FEAFERRIC IRON A HEXA COORDINATED SUBSTRATE BINDING SITE BLOCKED BY A SOLVENT MOLECULE	H - 75

Clusters included in this Subclass