Information on SUBCLASS 4.4.1 |
Subclass Accession number: 9042
Subclass: 4.4.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 9 Average sequence ID (%) : 15.9 +/- 20.2 Average RMSD (Å) : 0.667 +/- 0.265 Consensus geometry
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Consensus Sequence: | pXGXXXhX |
(φψ)-conformation: | aalbabaa |
Pattern: | x | x | x | x | x | [dehknqy] | x | [gr] | x | x | x | x | x | [deqst] | x |
Conservation: | -0.073 | 0.242 | -0.520 | -0.284 | -0.341 | 0.219 | -0.763 | 3.250 | -0.629 | -0.823 | -0.123 | -0.623 | -0.394 | 0.803 | 0.059 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1d3g_A_365 | 1d3g | A | 375 | 389 | EALLKEQGFGGVTDA | HHHHHHTT-SSHHHH | aaaaaaavxabaaaa |
1eep_A_352 | 1eep | A | 364 | 378 | MSGMGYLGAATISDL | HHHHHHHT-SSHHHH | aaaaaaavbabaaaa |
1ep3_A_279 | 1ep3 | A | 288 | 302 | PELMDQYRIESLESL | HHHHHHTT-S-HHHH | aaaaaaalbabaaaa |
1ile_*_88 | 1ile | - | 93 | 107 | LEVEKKLGLKSKREI | HHHHHHTT--SHHHH | aaaaaaavxabaaaa |
1jr1_A_453 | 1jr1 | A | 465 | 479 | QHSCQDIGAKSLTQV | HHHHHHTT-SBHHHH | aaaaaaavbabaaaa |
1jr1_B_453 | 1jr1 | B | 465 | 479 | QHSCQDIGAKSLTQV | HHHHHHHT-SBHHHH | aaaaaaavxabaaaa |
1m6i_A_517 | 1m6i | A | 518 | 532 | KSATEQSGTGIRSES | HHHHHHHS-S-HHHH | aaaaaaavbaxaaaa |
1me8_A_443 | 1me8 | A | 455 | 469 | KSTMCNCGALTIPQL | HHHHHHTT-SBHHHH | aaaaaaavbabaaaa |
1qh5_A_230 | 1qh5 | A | 230 | 244 | KTVQQHAGETDPVTT | HHHHHHHT-SSHHHH | aaaaaaavbabaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ile_*_88 | 1ile | * | ZNZINC ION | L - 89 |
1ile_*_88 | 1ile | * | ZNZINC ION | L - 93 |
1qh5_A_230 | 1qh5 | A | GTTGLUTATHIONE | R - 249 |
1qh5_A_230 | 1qh5 | A | GTTGLUTATHIONE | K - 252 |
1qh5_A_230 | 1qh5 | A | GTTGLUTATHIONE | D - 253 |
Clusters included in this Subclass |
CLUSTER: HH.3.129 |
CLUSTER: HH.5.22 |
CLUSTER: HH.6.94 |