Information on SUBCLASS 4.8.2 |
Subclass Accession number: 9051
Subclass: 4.8.2 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 13.7 +/- 12.7 Average RMSD (Å) : 0.550 +/- 0.129 Consensus geometry
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Consensus Sequence: | AXXGhpXp |
(φψ)-conformation: | aaplppaa |
Pattern: | x | [ADN] | [DQRT] | [AFM] | x | [EGQS] | [DET] | [IVW] | [AG] | x | [AL] | x | [AKL] | [GS] | [AKV] | [ERS] | x | [DEST] | x | x | [AEN] | x | [AIL] | x | [DERT] | x | [ALWY] | x |
Conservation: | -1.085 | -0.313 | -0.385 | 0.351 | -1.085 | -0.152 | 1.143 | 0.511 | 1.794 | -1.473 | 1.152 | -0.541 | -0.382 | 2.978 | -0.277 | 0.300 | -1.240 | 0.314 | 1.362 | -0.336 | -0.254 | -0.385 | 0.601 | -0.929 | -0.230 | 0.113 | -0.463 | -1.085 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1gwe_A_440 | 1gwe | A | 443 | 470 | RDDFVETVAGALKGVRQDVQARAFEYWK | HHHHHHHHHHHHTT--HHHHHHHHHHHH | aaaaaaaaaaaaxvxpaaaaaaaaaaaa |
1nth_A_380 | 1nth | A | 382 | 409 | EARMMGEVARATAGVEISEVNVILDKLV | HHHHHHHHHHHHTT--HHHHHHHHHHHH | aaaaaaaaaaaapvxpaaaaaaaaaaaa |
1qsa_A_397 | 1qsa | A | 397 | 424 | DNTARSEWANLVKSKSKTEQAQLARYAF | HHHHHHHHHHHHTT--HHHHHHHHHHHH | aaaaaaaaaaaaxvxxaaaaaaaaaaaa |
1toh_*_343 | 1toh | - | 345 | 372 | FAQFSQDIGLASLGASDEEIEKLSTVYW | HHHHHHHHHHHHTT--HHHHHHHHHHHH | aaaaaaaaaaaapvxxaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1qsa_A_397 | 1qsa | A | ACTACETATE ION | T - 399 |
1toh_*_343 | 1toh | * | FEFE (III) ION | Y - 371 |
Clusters included in this Subclass |
CLUSTER: HH.4.107 |