Information on SUBCLASS 4.27.1 |
Subclass Accession number: 9076
Subclass: 4.27.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 16.7 +/- 16.2 Average RMSD (Å) : 0.550 +/- 0.173 Consensus geometry
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Consensus Sequence: | XhpGXXpX |
(φψ)-conformation: | aapgppaa |
Pattern: | x | [AEKS] | [EQS] | [LV] | [AER] | [AEKR] | [AGKQ] | [FLWY] | x | [G] | [KL] | [DGST] | x | [EG] | x | [AFLV] |
Conservation: | -0.742 | -0.330 | 0.468 | 0.677 | -0.126 | -0.285 | -0.696 | 0.401 | -0.833 | 3.237 | -0.222 | -0.467 | -0.925 | 0.508 | -0.061 | -0.605 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b9b_A_140 | 1b9b | A | 145 | 160 | EKQVREGFYGLDKEEA | HHHHHHHHTT--HHHH | aaaaaaaapvbxaaaa |
1eyq_A_58 | 1eyq | A | 59 | 74 | VASLAAKWKGKSSEEL | HHHHHHHHTT--HHHH | aaaaaaaaxvxxaaaa |
1i6k_A_253 | 1i6k | A | 253 | 268 | IEELERQYEGKGYGVF | HHHHHHHTTT--HHHH | aaaaaaaapvxxaaaa |
2btm_A_138 | 2btm | A | 143 | 158 | ASQVEKALAGLTPEQV | HHHHHHHHTT--HHHH | aaaaaaaapgxbaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1i6k_A_253 | 1i6k | A | MSESELENOMETHIONINE | R - 286 |
1i6k_A_253 | 1i6k | A | MSESELENOMETHIONINE | Y - 287 |
1i6k_A_253 | 1i6k | A | GOLGLYCEROL | Y - 287 |
1i6k_A_253 | 1i6k | A | MSESELENOMETHIONINE | H - 288 |
1i6k_A_253 | 1i6k | A | MSESELENOMETHIONINE | H - 289 |
Clusters included in this Subclass |
CLUSTER: HH.4.106 |