Information on SUBCLASS 5.3.3 |
Subclass Accession number: 9100
Subclass: 5.3.3 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 15.9 +/- 14.0 Average RMSD (Å) : 0.533 +/- 0.153 Consensus geometry
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Consensus Sequence: | pXcQXhPXX |
(φψ)-conformation: | aalppppaa |
Pattern: | x | [GIY] | [EKR] | [LMV] | x | [KRS] | x | [ILY] | x | [EKR] | [AKM] | [GK] | [Q] | [LT] | [LV] | [P] | [LTV] | x | [LTY] | x | [EKL] | x | [LMY] |
Conservation: | -0.907 | -1.049 | 0.371 | 0.371 | -0.552 | 0.016 | -0.765 | -0.055 | -0.552 | 0.371 | -0.552 | 0.313 | 2.074 | 0.255 | 0.565 | 3.351 | -0.197 | -0.978 | -0.552 | -0.505 | -0.694 | -0.345 | 0.016 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1j1b_A_139 | 1j1b | A | 139 | 161 | VYRVARHYSRAKQTLPVIYVKLY | HHHHHHHHHHTT----HHHHHHH | aaaaaaaaaaalbxxpaaaaaaa |
1nst_A_842 | 1nst | A | 856 | 878 | NIELSKLLYKMGQTLPTWLREDL | HHHHHHHHHHHT----HHHHHHH | aaaaaaaaaaavxxxxaaaaaaa |
3adk_*_52 | 3adk | - | 53 | 75 | RGKMLSEIMEKGQLVPLETVLDM | HHHHHHHHHTTT----HHHHHHH | aaaaaaaaaaavxxxxaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1j1b_A_139 | 1j1b | A | ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | R - 141 |
Clusters included in this Subclass |
CLUSTER: HH.6.108 |