Information on SUBCLASS 6.24.1 |
Subclass Accession number: 9153
Subclass: 6.24.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 53.7 +/- 1.0 Average RMSD (Å) : 0.267 +/- 0.115 Consensus geometry
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Consensus Sequence: | hhDXpRYNhL |
(φψ)-conformation: | aapaaFalaa |
Pattern: | [R] | [DN] | [FL] | [CI] | [D] | [DPT] | [HQY] | [R] | [Y] | [N] | [IL] | [L] | [E] | [DEK] | [V] | [AG] | x | x |
Conservation: | 0.763 | 0.012 | -0.401 | -0.115 | 1.295 | -1.188 | -0.597 | 0.763 | 1.827 | 1.295 | -0.282 | 0.231 | 0.763 | -0.715 | 0.231 | -0.620 | -1.957 | -1.306 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1d0c_A_367 | 1d0c | A | 367 | 384 | RNLCDPHRYNILEDVAVC | HHHHSTTTT--HHHHHHH | aaaapaaFalaaaaaaaa |
1jwk_A_375 | 1jwk | A | 375 | 392 | RDFCDTQRYNILEEVGRR | HHHH-TTTT--HHHHHHH | aaaaxaaFalaaaaaaaa |
1mjt_A_234 | 1mjt | A | 234 | 251 | RNFIDDYRYNLLEKVADA | HHHH-TTTT--HHHHHHH | aaaapaaFalaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1d0c_A_367 | 1d0c | A | INE3-BROMO-7-NITROINDAZOLE | R - 367 |
1d0c_A_367 | 1d0c | A | GOLGLYCEROL | R - 367 |
1d0c_A_367 | 1d0c | A | ACTACETATE ION | N - 368 |
1d0c_A_367 | 1d0c | A | GOLGLYCEROL | D - 371 |
1d0c_A_367 | 1d0c | A | GOLGLYCEROL | H - 373 |
1d0c_A_367 | 1d0c | A | ACTACETATE ION | R - 374 |
1d0c_A_367 | 1d0c | A | GOLGLYCEROL | R - 374 |
1d0c_A_367 | 1d0c | A | CADCACODYLIC ACID | D - 380 |
1d0c_A_367 | 1d0c | A | CADCACODYLIC ACID | V - 383 |
1d0c_A_367 | 1d0c | A | CADCACODYLIC ACID | C - 384 |
1jwk_A_375 | 1jwk | A | HEMPROTOPORPHYRIN IX CONTAINING FE | R - 375 |
1jwk_A_375 | 1jwk | A | HBI7,8-DIHYDROBIOPTERIN | R - 375 |
1mjt_A_234 | 1mjt | A | HEMPROTOPORPHYRIN IX CONTAINING FE | R - 234 |
1mjt_A_234 | 1mjt | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | R - 234 |
1mjt_A_234 | 1mjt | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | Y - 240 |
Clusters included in this Subclass |
CLUSTER: HH.6.123 |