ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 9.20.1

Subclass Accession number: 9214
Subclass: 9.20.1

Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 3

Average sequence ID (%) : 49.4 +/- 6.6
Average RMSD (Å) : 0.233 +/- 0.058

Consensus geometry

d (Å): 7

delta (°): 0-45

theta (°): 90-135

rho (°): 90-135

Consensus Sequence:	RhhPpGpGpVNpX
(φψ)-conformation:	aabaagbepppaa

Pattern:	[W]	[PS]	[R]	[IV]	[FL]	[P]	[EQT]	[G]	[TY]	[G]	[ER]	[V]	[N]	[EQR]	[AK]	[G]	[LV]	[DE]	[FY]	[Y]	[HN]	[KR]	[IL]	[FIV]	[AD]	[ET]	[CL]	[HL]	[AEK]
Conservation:	3.230	-0.545	0.539	-0.122	-0.626	1.436	-0.957	0.987	-0.833	0.987	-0.527	0.090	0.987	-0.658	-0.799	0.987	-0.565	0.036	0.417	1.436	0.257	-0.116	-0.336	-0.807	-0.916	-0.740	-0.610	-1.124	-1.106

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1od0_A_82	1od0	A	82	110	WPRILPEGTGRVNQKGLDFYNRIIDTLLE	HHHH-TTSSS---HHHHHHHHHHHHHHHH	aaaabaagbexxxaaaaaaaaaaaaaaaa
1pbg_A_77	1pbg	A	77	105	WSRIFPTGYGEVNEKGVEFYHKLFAECHK	HHHHSTTSSSS--HHHHHHHHHHHHHHHH	aaaabaagbexxxaaaaaaaaaaaaaaaa
1qox_A_82	1qox	A	82	110	WPRVLPQGTGEVNRAGLDYYHRLVDELLA	HHHHSTTSSSS--HHHHHHHHHHHHHHHH	aaaabaagbepxxaaaaaaaaaaaaaaaa

Clusters included in this Subclass