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Information on SUBCLASS 11.8.1
Subclass Accession number: 9241
Subclass: 11.8.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 28.0 +/- 19.9
Average RMSD (Å) : 1.000 +/- 0.265

Consensus geometry
d (Å): 19 delta (°): 135-180 theta (°): 45-90 rho (°): 180-225
Consensus Sequence: XpcphPXhhRXXWKT
(φψ)-conformation: aalbppaappaapaa
Pattern: [KPR][RT]x[AKR][EF][LV][EL][DKN][EY][FWY]x[AEK][HS][GK][EKR][FIL][P][DPS][CI][AV][R][KMT]x[W][K][T][CLV][KS][KNR][IL]x
Conservation:-0.459-0.234-1.030-0.511-0.504-0.035-0.749-0.355-0.1080.630-0.926-0.6150.218-0.207-0.148-0.3042.032-0.563-0.126-0.2261.098-0.771-0.6673.9001.0981.098-0.459-0.083-0.2000.187-0.978
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1eke_A_1881eke   A189219KTIKFLEDYFKKHKKLPDIARTHWKTCKRILHHHHHHHHHHHHHSS--TTB-TTSHHHHHHHaaaaaaaaaaaaavbxxaaxxaaxaaaaaaa
1i39_A_1681i39   A168198PRTREVLKEWIASGRIPSCVRMRWKTVSNLRHHHHHHHHHHHHHT---TTB-TTSHHHHHHHaaaaaaaaaaaaavbxpaaxxaaxaaaaaaa
1io2_A_1741io2   A175205RTRAFLENYYREHGEFPPIVRKGWKTLKKIAHHHHHHHHHHHHHSS--TTB-TT-HHHHHHHaaaaaaaaaaaaavbxxaaxxaaxaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1eke_A_1881eke   A     MSESELENOMETHIONINE R - 209
1eke_A_1881eke   A     MSESELENOMETHIONINE H - 211
1eke_A_1881eke   A     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID H - 211
1eke_A_1881eke   A     MSESELENOMETHIONINE W - 212
1eke_A_1881eke   A     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID W - 212
1eke_A_1881eke   A     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID K - 213
1eke_A_1881eke   A     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID T - 214

Clusters included in this Subclass
CLUSTER: HH.10.56