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Information on SUBCLASS 30.1.1
Subclass Accession number: 9268
Subclass: 30.1.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 6

Average sequence ID (%) : 38.0 +/- 23.5
Average RMSD (Å) : 0.783 +/- 0.117

Consensus geometry
d (Å): 21 delta (°): 90-135 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: cRDXXXXXphpXhDhpRpXXXphXFGpGhHhChG
(φψ)-conformation: aapaaabplaabpbaapppbwpaaaebeaappaa
Pattern: x[AGLMP]x[AS][gn][r][D][EGP][AEKRT]x[aft][aps][ADR][GPV][deh]x[FLV][d][AFPV][DNRST][R][ADENQ][kpt]x[AGPS][DHS][LTV][AGST][FY][G][HQRS][G][ipv][H][FHLVY][C][LMPV][G][aqr][aps][L][A][KR]x[EM][AGIL][er][IMTV][ATV][FILVY][EGKQRT][AET][FILW][flw]
Conservation:-0.855-1.000-0.5730.381-0.4180.0871.883-0.430-0.654-0.782-0.827-0.513-0.414-0.205-0.460-0.826-0.1150.251-0.825-0.5371.408-0.447-0.567-1.003-0.4970.258-0.214-0.3371.3811.883-0.1361.883-0.7012.833-0.6123.309-0.4441.883-0.703-0.6130.9330.9330.884-0.6960.182-0.837-0.629-0.127-0.161-0.304-0.744-0.353-0.341-0.474
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1io7_A_2821io7   A282335IASANRDEEVFHDGEKFIPDRNPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSHHHHTT-TTTSTTTTS--TT--S----TT--GGGS-TTHHHHHHHHHHHHHHHHaaaaaapaaabplaabxbaapbwbwxaaaebeaappaaaaaaaaaaaaaaaaaa
1jip_A_3161jip   A316369NGAANRDPKQFPDPHRFDVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFHHHHTT-TTTSSSTTS--TTS--TT--TT--STT--TTHHHHHHHHHHHHHHHHaaaaaaxaaabwlaaxxbaapxapvxaaaebeaapxaaaaaaaaaaaaaaaaaa
1lfk_A_3121lfk   A312365LPAANRDPALAPDVDRLDVTREPIPHVAFGHGVHHCLGAALARLELRTVFTELWHHHHTT-TTT-TTTTS--TTS------TT--STTS-TTHHHHHHHHHHHHHHHHaaaaaapaaabaaaabxbaaxxpbwxaaaebeaappaaaaaaaaaaaaaaaaaa
1q5d_A_3301q5d   A330383IPSALRDGTVFSRPDVFDVRRDTSASLAYGRGPHVCPGVSLARLEAEIAVGTIFHHHHTT-TTTSSSTTS--TTS--TT--TT--GGG--TTHHHHHHHHHHHHHHHHaaaaaaxaaabxlaabxbaaxxaaapaaaebeaappaaaaaaaaaaaaaaaaaa
1qmq_A_3221qmq   A322375QMLSGLDERENAAPMHVDFSRQKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLHHHHTT-TTTSSSTTS--TT-S-----TT--STT--TTHHHHHHHHHHHHHHHHaaaaaaxaaabxlaaxxbaapabxxbaaaebeaappaaaaaaaaaaaaaaaaaa
1ued_A_3211ued   A321374ILMANRDEALTPDPDVLDANRAAVSDVGFGHGIHYCVGAALARSMLRMAYQTLWHHHHTT-TTTSSSTTS--TTS------TT--STTS-TTHHHHHHHHHHHHHHHHaaaaaaxaaabxlaabxbaaxxpbxxaaaebeaappaaaaaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1io7_A_2821io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 282
1io7_A_2821io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 308
1io7_A_2821io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE S - 309
1io7_A_2821io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 310
1io7_A_2821io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 311
1io7_A_2821io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE S - 312
1io7_A_2821io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 314
1io7_A_2821io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 315
1io7_A_2821io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 316
1io7_A_2821io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE C - 317
1io7_A_2821io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 318
1io7_A_2821io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 319
1io7_A_2821io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 320
1io7_A_2821io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 322
1io7_A_2821io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 323
1io7_A_2821io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 324
1io7_A_2821io7   A     HEMPROTOPORPHYRIN IX CONTAINING FE E - 326
1jip_A_3161jip   A     HEMPROTOPORPHYRIN IX CONTAINING FE N - 316
1jip_A_3161jip   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 342
1jip_A_3161jip   A     HEMPROTOPORPHYRIN IX CONTAINING FE S - 343
1jip_A_3161jip   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 344
1jip_A_3161jip   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 345
1jip_A_3161jip   A     HEMPROTOPORPHYRIN IX CONTAINING FE Q - 346
1jip_A_3161jip   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 348
1jip_A_3161jip   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 349
1jip_A_3161jip   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 350
1jip_A_3161jip   A     HEMPROTOPORPHYRIN IX CONTAINING FE C - 351
1jip_A_3161jip   A     KTNCIS-1-ACETYL-4-(4-((2-(2,4-DICHLOROPHENYL)-2-(1H-IMIDAZOL-1-YLMETHYL)-1,3-DIOXOLAN-4-YL)METHOXY)PHENYL) PIPERAZINE C - 351
1jip_A_3161jip   A     HEMPROTOPORPHYRIN IX CONTAINING FE M - 352
1jip_A_3161jip   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 353
1jip_A_3161jip   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 354
1jip_A_3161jip   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 356
1jip_A_3161jip   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 357
1jip_A_3161jip   A     HEMPROTOPORPHYRIN IX CONTAINING FE E - 360
1lfk_A_3121lfk   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 312
1lfk_A_3121lfk   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 338
1lfk_A_3121lfk   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 339
1lfk_A_3121lfk   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 340
1lfk_A_3121lfk   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 341
1lfk_A_3121lfk   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 342
1lfk_A_3121lfk   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 344
1lfk_A_3121lfk   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 345
1lfk_A_3121lfk   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 346
1lfk_A_3121lfk   A     HEMPROTOPORPHYRIN IX CONTAINING FE C - 347
1lfk_A_3121lfk   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 348
1lfk_A_3121lfk   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 349
1lfk_A_3121lfk   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 350
1lfk_A_3121lfk   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 352
1lfk_A_3121lfk   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 353
1lfk_A_3121lfk   A     HEMPROTOPORPHYRIN IX CONTAINING FE E - 356
1lfk_A_3121lfk   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 357
1q5d_A_3301q5d   A     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 358
1q5d_A_3301q5d   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 359
1q5d_A_3301q5d   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 360
1q5d_A_3301q5d   A     HEMPROTOPORPHYRIN IX CONTAINING FE P - 362
1q5d_A_3301q5d   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 363
1q5d_A_3301q5d   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 364
1q5d_A_3301q5d   A     HEMPROTOPORPHYRIN IX CONTAINING FE C - 365
1q5d_A_3301q5d   A     EPB7,11-DIHYDROXY-8,8,10,12,16-PENTAMETHYL-3-[1-METHYL-2-(2-METHYL-THIAZOL-4-YL)VINYL]-4,17-DIOXABICYCLO[14.1.0]HEPTADECANE-5,9-DIONE C - 365
1q5d_A_3301q5d   A     HEMPROTOPORPHYRIN IX CONTAINING FE P - 366
1q5d_A_3301q5d   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 367
1q5d_A_3301q5d   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 368
1q5d_A_3301q5d   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 370
1q5d_A_3301q5d   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 371
1q5d_A_3301q5d   A     HEMPROTOPORPHYRIN IX CONTAINING FE E - 374
1qmq_A_3221qmq   A     HEMPROTOPORPHYRIN IX CONTAINING FE Q - 322
1qmq_A_3221qmq   A     ACTACETATE ION R - 330
1qmq_A_3221qmq   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 348
1qmq_A_3221qmq   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 349
1qmq_A_3221qmq   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 351
1qmq_A_3221qmq   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 352
1qmq_A_3221qmq   A     HEMPROTOPORPHYRIN IX CONTAINING FE S - 354
1qmq_A_3221qmq   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 355
1qmq_A_3221qmq   A     ACTACETATE ION L - 356
1qmq_A_3221qmq   A     HEMPROTOPORPHYRIN IX CONTAINING FE C - 357
1qmq_A_3221qmq   A     ACTACETATE ION C - 357
1qmq_A_3221qmq   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 358
1qmq_A_3221qmq   A     ACTACETATE ION L - 358
1qmq_A_3221qmq   A     ACTACETATE ION G - 359
1qmq_A_3221qmq   A     HEMPROTOPORPHYRIN IX CONTAINING FE Q - 360
1qmq_A_3221qmq   A     ACTACETATE ION Q - 360
1qmq_A_3221qmq   A     ACTACETATE ION H - 361
1qmq_A_3221qmq   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 362
1qmq_A_3221qmq   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 363
1qmq_A_3221qmq   A     HEMPROTOPORPHYRIN IX CONTAINING FE E - 366
1qmq_A_3221qmq   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 367
1ued_A_3211ued   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 321
1ued_A_3211ued   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 347
1ued_A_3211ued   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 348
1ued_A_3211ued   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 349
1ued_A_3211ued   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 350
1ued_A_3211ued   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 351
1ued_A_3211ued   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 353
1ued_A_3211ued   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 354
1ued_A_3211ued   A     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 355
1ued_A_3211ued   A     HEMPROTOPORPHYRIN IX CONTAINING FE C - 356
1ued_A_3211ued   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 357
1ued_A_3211ued   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 358
1ued_A_3211ued   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 359
1ued_A_3211ued   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 361
1ued_A_3211ued   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 362
1ued_A_3211ued   A     HEMPROTOPORPHYRIN IX CONTAINING FE R - 363
1ued_A_3211ued   A     HEMPROTOPORPHYRIN IX CONTAINING FE M - 365
1ued_A_3211ued   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 366
1ued_A_3211ued   A     PEGDI(HYDROXYETHYL)ETHER W - 374
1ued_A_3211ued   A     PEGDI(HYDROXYETHYL)ETHER R - 375
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1qmq_A_3221qmq   A HEMHEM BINDING SITEF - 350
1qmq_A_3221qmq   A HEMHEM BINDING SITEG - 359

Clusters included in this Subclass
CLUSTER: HH.33.0