Information on SUBCLASS 1.1.34 |
Subclass Accession number: 970
Subclass: 1.1.34 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 6.3 (>75 %) 6.3.2 (>75 %) 6.3.2.1 GO : GO:0004592 (>75 %) GO:0016624 (>75 %) GO:0016874 (>75 %) GO:0016879 (>75 %) GO:0016881 (>75 %) GO:0016903 (>75 %) SCOP : 52373 (>75 %) 52374 (>75 %) 52517 (>75 %) 52518 (>75 %) 63976 (>75 %) 88766 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 14.1 +/- 17.5 Average RMSD (Å) : 0.725 +/- 0.171 Consensus geometry
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Consensus Sequence: | XXXXX |
(φψ)-conformation: | bbpaa |
Pattern: | x | [FQ] | x | x | x | [GKR] | [DEHQ] | x | [DG] | [LV] | [AKLV] | x | x |
Conservation: | 0.072 | 1.053 | -1.840 | -0.977 | 0.880 | 0.265 | 0.617 | -0.396 | 1.312 | 1.281 | -0.910 | -0.844 | -0.512 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ols_A_108 | 1ols | A | 109 | 121 | VFGQYREAGVLMY | EE--SS-HHHHHH | bbbFaaaaaaaaa |
1or4_A_25 | 1or4 | A | 25 | 37 | IQLTNKHADVKKQ | EE--GGGHHHHHH | bbbxaaaaaaaaa |
1umd_A_90 | 1umd | A | 91 | 103 | VFPYYRDHGLALA | EE--TTTHHHHHH | bbxbaaaaaaaaa |
1usc_A_69 | 1usc | A | 73 | 85 | SFHPFGQKDLVHW | EE-BGGGHHHHHH | bbbxaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ols_A_108 | 1ols | A | TDPTHIAMIN DIPHOSPHATE | Q - 112 |
1ols_A_108 | 1ols | A | TDPTHIAMIN DIPHOSPHATE | Y - 113 |
1ols_A_108 | 1ols | A | TDPTHIAMIN DIPHOSPHATE | R - 114 |
1umd_A_90 | 1umd | A | MGMAGNESIUM ION | Y - 94 |
1umd_A_90 | 1umd | A | TDPTHIAMIN DIPHOSPHATE | Y - 94 |
1umd_A_90 | 1umd | A | TDPTHIAMIN DIPHOSPHATE | Y - 95 |
1umd_A_90 | 1umd | A | COI2-OXO-4-METHYLPENTANOIC ACID | Y - 95 |
1umd_A_90 | 1umd | A | TDPTHIAMIN DIPHOSPHATE | R - 96 |
1usc_A_69 | 1usc | A | FMNFLAVIN MONONUCLEOTIDE | V - 83 |
1usc_A_69 | 1usc | A | FMNFLAVIN MONONUCLEOTIDE | H - 84 |
1usc_A_69 | 1usc | A | FMNFLAVIN MONONUCLEOTIDE | W - 85 |
1usc_A_69 | 1usc | A | FMNFLAVIN MONONUCLEOTIDE | L - 86 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1ols_A_108 | 1ols | A | KAPOTASSIUM-BINDING SITE IN THE ALPHA-SUBUNIT | Q - 112 |
1ols_A_108 | 1ols | A | TDPTDP BINDING SITE FOR CHAIN A | Y - 113 |
1ols_A_108 | 1ols | A | TDPTDP BINDING SITE FOR CHAIN A | R - 114 |
Clusters included in this Subclass |
CLUSTER: EH.4.177 |