| Accession | HsInv0321 | Region of the inversion | chr9:114896975-114931528 |
| Status | Obsolete | Prediction type | Simple |
| Estimated Inversion Size | 22,230 bp | Supporting predictions | 2 |
| Inverted allele frequency | ND | Mechanism of origin | ND |
| Functional effect | Intergenic breakpoints | Breakpoint 1 | chr9:114896975-114909510 |
| Ancestral orientation | NA | Breakpoint 2 | chr9:114919415-114931528 |
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Human Polymorphic Inversion DataBase
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General information
- Region map
+ Predictions
| Description | Paired-end mapping analysis of the J. Craig Venter genome (HuRef) | ||||||||||||||
| Method | Paired-end mapping (PEM) | ||||||||||||||
| Name | |||||||
| Breakpoint 1 | chr9:114904808-114913348 | Breakpoint 2 | chr9:114915155-114922900 | ||||
| Individuals |
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- Martinez-Fundichely et al. 2014 (in preparation)
| Description | Accurate prediction of inversions in the human genome from Kidd et al. 2008 fosmid paired-end mapping data using the GRIAL algorithm, and validation of some predictions by sequence analysis and PCR | ||||||||||||||||||||||||||||||||||||||
| Method | Paired-end mapping (PEM) | ||||||||||||||||||||||||||||||||||||||
| Name | |||||||||||||||||||||||
| Breakpoint 1 | chr9:114881984-114909510 | Breakpoint 2 | chr9:114919415-114945930 | ||||||||||||||||||||
| D/C Score | NA | Disc. Support Prob. | 0.9271 | ||||||||||||||||||||
| Support | 12 probes  | ||||||||||||||||||||||
| Individuals |
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+ Validation and genotyping
No validations are found
+ Frequency
No frequency studied
+ Breakpoints
| Breakpoint 1 | chr9:114896975-114909510 | Breakpoint 2 | chr9:114919415-114931528 | |||||||||||||
| Definition method | Default informatic definition | |||||||||||||||
| Mechanism of origin |
ND
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| Flexibility | 11.36 | GC content | 0.5 | Stability | 1.88 |
| Position SD1 | Size (bp) | Position SD2 | Size (bp) | Identity | Relative orientation |
| chr9:114906840-114913782 | 6,943 | chr9:114914993-114921930 | 6,938 | 0.991 | Inverted |
+ Evolutionary history
| Ancestral allele | NA | Age | ND |
| Derived allele | NA | Origin | ND |
+ Orientation in other species
Not defined
+ Age
Not defined
+ Origin
Not defined
+ Functional effects
No genes disrupted by the inversion breakpoints
+ Inversion phenotypical effects
Not defined
+ Report history
HsInv0321 and HsInv0069 merge into HsInv1124
- 2015-02-23 10:14:36
| Breakpoint 1 | chr9:114898502-114909510 | Breakpoint 2 | chr9:114919415-114930001 |
| Assembly | hg18 | ||
| Definition method | Default informatic definition | ||
- 2015-02-23 10:14:36
| Breakpoint 1 | chr9:114881984-114909510 | Breakpoint 2 | chr9:114919415-114945930 |
| Assembly | hg18 | ||
| Definition method | Default informatic definition | ||
- 2015-02-23 10:14:36
| Breakpoint 1 | chr9:114896975-114909510 | Breakpoint 2 | chr9:114919415-114931528 |
| Assembly | hg18 | ||
| Definition method | Default informatic definition | ||
