ArchDB - Biological DataBase of Protein Loops

Information on 1gpu_A_418

Loop code: 1gpu_A_418
PDB: 1gpu
Chain: A
Type: HE alpha-beta

Loop Start: 418 Loop Length: 4
Sec Struct Nt length: 14 Sec Struct Ct length: 7
Structure geometry

d (Å): 8.174800

delta (°): 112.720901

theta (°): 169.889603

rho (°): 89.119598

Sequence:	EHAMGAIMNGISAFGANYKPYGGTF
Sec Struct:	HHHHHHHHHHHHHH-TT-EEEEEEE

PDB ligands within a cut-off distance of 6 Å in this loop

Ligands	Residue	atSS	atLOOP
THD2-[3-[(4-AMINO-2-METHYL-5-PYRIMIDINYL)METHYL]-2-(1,2-DIHYDROXYETHYL)-4-METHYL-1,3-THIAZOL-3-IUM-5-YL]ETHYL TRIHYDROGEN DIPHOSPHATE	E - 418	1	0
THD2-[3-[(4-AMINO-2-METHYL-5-PYRIMIDINYL)METHYL]-2-(1,2-DIHYDROXYETHYL)-4-METHYL-1,3-THIAZOL-3-IUM-5-YL]ETHYL TRIHYDROGEN DIPHOSPHATE	T - 441	1	0
THD2-[3-[(4-AMINO-2-METHYL-5-PYRIMIDINYL)METHYL]-2-(1,2-DIHYDROXYETHYL)-4-METHYL-1,3-THIAZOL-3-IUM-5-YL]ETHYL TRIHYDROGEN DIPHOSPHATE	F - 442	1	0

PDB Site Annotation

Site	Residue	atSS	atLOOP
AC4 - THD BINDING SITE FOR CHAIN B	E - 418	1	0