PDB: 1a0c Compound: xylose isomerase Classification: KETOLISOMERASE Entry date in PDB: 1998-06-03 Resolution [Å]: 2.50 R-Factor: 0.168

CHAIN: A SWISS-PROT/TREMBL: P19148    KEYWORD: 3D-structure    Cobalt    Isomerase    Metal-binding    Pentose shunt    Xylose metabolism    EC: 5.3.1.5 SCOP: c.1.15.3 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    Xylose isomerase-like    Xylose isomerase    D-xylose isomerase    Clostridium thermosulfurogenes, also known as Thermoanaerobacter thermosulfurigenes GO:  xylose isomerase activity    carbohydrate metabolism    CHAIN: B SWISS-PROT/TREMBL: P19148    KEYWORD: 3D-structure    Cobalt    Isomerase    Metal-binding    Pentose shunt    Xylose metabolism    EC: 5.3.1.5 SCOP: c.1.15.3 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    Xylose isomerase-like    Xylose isomerase    D-xylose isomerase    Clostridium thermosulfurogenes, also known as Thermoanaerobacter thermosulfurigenes GO:  xylose isomerase activity    carbohydrate metabolism    CHAIN: C SWISS-PROT/TREMBL: P19148    KEYWORD: 3D-structure    Cobalt    Isomerase    Metal-binding    Pentose shunt    Xylose metabolism    EC: 5.3.1.5 SCOP: c.1.15.3 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    Xylose isomerase-like    Xylose isomerase    D-xylose isomerase    Clostridium thermosulfurogenes, also known as Thermoanaerobacter thermosulfurigenes GO:  xylose isomerase activity    carbohydrate metabolism    CHAIN: D SWISS-PROT/TREMBL: P19148    KEYWORD: 3D-structure    Cobalt    Isomerase    Metal-binding    Pentose shunt    Xylose metabolism    EC: 5.3.1.5 SCOP: c.1.15.3 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    Xylose isomerase-like    Xylose isomerase    D-xylose isomerase    Clostridium thermosulfurogenes, also known as Thermoanaerobacter thermosulfurigenes GO:  xylose isomerase activity    carbohydrate metabolism

Image Source: PDB

Loops in ArchDB40 clusters

1a0c_A_240 - EH => SUBCLASS : 4.22.1
1a0c_A_268 - HH => SUBCLASS : 3.1.1
1a0c_A_392 - HH => SUBCLASS : 4.5.2
1a0c_A_392 - HH => SUBCLASS : 4.41.1

Loops in ArchDB95 clusters

1a0c_A_240 - EH => SUBCLASS : 4.16.1
1a0c_A_192 - EH => SUBCLASS : 7.3.1
1a0c_A_135 - EH => SUBCLASS : 17.1.1
1a0c_A_227 - AR => SUBCLASS : 8.27.1
1a0c_A_268 - HH => SUBCLASS : 3.1.1
1a0c_A_392 - HH => SUBCLASS : 4.55.1

Loops in ArchDB-EC clusters

1a0c_A_404 - HH => SUBCLASS : 10.13.1

Loops not clustered in ArchDB

1a0c_A_227 - AR
1a0c_A_183 - AR
1a0c_A_22 - AR
1a0c_A_183 - AR
1a0c_A_22 - AR
1a0c_A_35 - EH
1a0c_A_262 - EH
1a0c_A_43 - EH
1a0c_A_291 - EH
1a0c_A_96 - EH
1a0c_A_335 - EH
1a0c_A_31 - HA
1a0c_A_11 - HA
1a0c_A_11 - HA
1a0c_A_31 - HA
1a0c_A_37 - HE
1a0c_A_314 - HE
1a0c_A_201 - HE
1a0c_A_74 - HE
1a0c_A_111 - HE
1a0c_A_278 - HE
1a0c_A_246 - HE
1a0c_A_159 - HE
1a0c_A_377 - HH
1a0c_A_47 - HH
1a0c_A_101 - HH
1a0c_A_349 - HH

1a0c A - percentage of sequence identity: 100
1a0c B - percentage of sequence identity: 100
1a0c C - percentage of sequence identity: 100
1a0c D - percentage of sequence identity: 100
1a0d A - percentage of sequence identity: 74
1a0d B - percentage of sequence identity: 74
1a0d C - percentage of sequence identity: 74
1a0d D - percentage of sequence identity: 74
1a0e A - percentage of sequence identity: 70
1a0e D - percentage of sequence identity: 70