PDB: 1b79 Compound: dnab helicase Classification: HYDROLASE Entry date in PDB: 1999-06-30 Resolution [Å]: 2.30 R-Factor: 0.263

CHAIN: A SWISS-PROT/TREMBL: P03005    KEYWORD: 3D-structure    ATP-binding    Complete proteome    DNA replication    DNA-binding    Helicase    Hydrolase    Primosome    EC: 3.6.1.- SCOP: a.81.1.1 All alpha proteins    N-terminal domain of DnaB helicase    N-terminal domain of DnaB helicase    N-terminal domain of DnaB helicase    N-terminal domain of DnaB helicase    Escherichia coli GO:  ATP binding    ATP binding    DNA binding    DNA binding    DNA helicase activity    DNA helicase activity    nucleoside-triphosphatase activity    nucleoside-triphosphatase activity    nucleotide binding    nucleotide binding    DNA replication    DNA replication    CHAIN: B SWISS-PROT/TREMBL: P03005    KEYWORD: 3D-structure    ATP-binding    Complete proteome    DNA replication    DNA-binding    Helicase    Hydrolase    Primosome    EC: 3.6.1.- SCOP: a.81.1.1 All alpha proteins    N-terminal domain of DnaB helicase    N-terminal domain of DnaB helicase    N-terminal domain of DnaB helicase    N-terminal domain of DnaB helicase    Escherichia coli GO:  ATP binding    ATP binding    DNA binding    DNA binding    DNA helicase activity    DNA helicase activity    nucleoside-triphosphatase activity    nucleoside-triphosphatase activity    nucleotide binding    nucleotide binding    DNA replication    DNA replication    CHAIN: C SWISS-PROT/TREMBL: P03005    KEYWORD: 3D-structure    ATP-binding    Complete proteome    DNA replication    DNA-binding    Helicase    Hydrolase    Primosome    EC: 3.6.1.- SCOP: a.81.1.1 All alpha proteins    N-terminal domain of DnaB helicase    N-terminal domain of DnaB helicase    N-terminal domain of DnaB helicase    N-terminal domain of DnaB helicase    Escherichia coli GO:  ATP binding    ATP binding    DNA binding    DNA binding    DNA helicase activity    DNA helicase activity    nucleoside-triphosphatase activity    nucleoside-triphosphatase activity    nucleotide binding    nucleotide binding    DNA replication    DNA replication    CHAIN: D SWISS-PROT/TREMBL: P03005    KEYWORD: 3D-structure    ATP-binding    Complete proteome    DNA replication    DNA-binding    Helicase    Hydrolase    Primosome    EC: 3.6.1.- SCOP: a.81.1.1 All alpha proteins    N-terminal domain of DnaB helicase    N-terminal domain of DnaB helicase    N-terminal domain of DnaB helicase    N-terminal domain of DnaB helicase    Escherichia coli GO:  ATP binding    ATP binding    DNA binding    DNA binding    DNA helicase activity    DNA helicase activity    nucleoside-triphosphatase activity    nucleoside-triphosphatase activity    nucleotide binding    nucleotide binding    DNA replication    DNA replication

Image Source: PDB

Loops in ArchDB40 clusters

1b79_A_29 - HH => SUBCLASS : 1.2.5
1b79_A_29 - HH => SUBCLASS : 1.2.15
1b79_A_83 - HH => SUBCLASS : 1.3.3
1b79_A_83 - HH => SUBCLASS : 1.3.13

Loops in ArchDB95 clusters

1b79_A_29 - HH => SUBCLASS : 1.2.8
1b79_A_83 - HH => SUBCLASS : 1.3.2

Loops in ArchDB-EC clusters

1b79_A_83 - HH => SUBCLASS : 1.3.2

Loops not clustered in ArchDB

1b79_A_47 - HH
1b79_A_62 - HH
1b79_A_96 - HH
1b79_A_101 - HH

1b79 A - percentage of sequence identity: 100
1b79 B - percentage of sequence identity: 100
1b79 C - percentage of sequence identity: 100
1b79 D - percentage of sequence identity: 100
1jwe A - percentage of sequence identity: 99