PDB: 1bd0 Compound: alanine racemase Classification: ISOMERASE Entry date in PDB: 1998-10-14 Resolution [Å]: 1.60 R-Factor: 0.240

CHAIN: A SWISS-PROT/TREMBL: P10724    KEYWORD: 3D-structure    Cell wall    Isomerase    Peptidoglycan synthesis    Pyridoxal phosphate    EC: 5.1.1.1 SCOP: b.49.2.2 All beta proteins    Domain of alpha and beta subunits of F1 ATP synthase-like    Alanine racemase C-terminal domain-like    Alanine racemase    Alanine racemase    Bacillus stearothermophilus SCOP: b.49.2.2 All beta proteins    Domain of alpha and beta subunits of F1 ATP synthase-like    Alanine racemase C-terminal domain-like    Alanine racemase    Alanine racemase    Bacillus stearothermophilus SCOP: c.1.6.1 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    PLP-binding barrel    Alanine racemase-like, N-terminal domain    Alanine racemase    Bacillus stearothermophilus GO:  alanine racemase activity    pyridoxal phosphate binding    alanine metabolism    CHAIN: B SWISS-PROT/TREMBL: P10724    KEYWORD: 3D-structure    Cell wall    Isomerase    Peptidoglycan synthesis    Pyridoxal phosphate    EC: 5.1.1.1 SCOP: b.49.2.2 All beta proteins    Domain of alpha and beta subunits of F1 ATP synthase-like    Alanine racemase C-terminal domain-like    Alanine racemase    Alanine racemase    Bacillus stearothermophilus SCOP: b.49.2.2 All beta proteins    Domain of alpha and beta subunits of F1 ATP synthase-like    Alanine racemase C-terminal domain-like    Alanine racemase    Alanine racemase    Bacillus stearothermophilus SCOP: c.1.6.1 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    PLP-binding barrel    Alanine racemase-like, N-terminal domain    Alanine racemase    Bacillus stearothermophilus GO:  alanine racemase activity    pyridoxal phosphate binding    alanine metabolism

Image Source: PDB

Loops in ArchDB40 clusters

1bd0_A_296 - HA => SUBCLASS : 2.1.1
1bd0_A_366 - HA => SUBCLASS : 2.4.1
1bd0_A_338 - EH => SUBCLASS : 1.1.3
1bd0_A_61 - EH => SUBCLASS : 2.1.1
1bd0_A_82 - EH => SUBCLASS : 5.12.2
1bd0_A_245 - AR => SUBCLASS : 1.1.12
1bd0_A_253 - AR => SUBCLASS : 3.1.1
1bd0_A_269 - AR => SUBCLASS : 3.2.8
1bd0_A_253 - AR => SUBCLASS : 3.3.1
1bd0_A_342 - HH => SUBCLASS : 3.3.7

Loops in ArchDB95 clusters

1bd0_A_338 - EH => SUBCLASS : 1.1.4
1bd0_A_61 - EH => SUBCLASS : 2.1.1
1bd0_A_101 - EH => SUBCLASS : 2.14.1
1bd0_A_82 - EH => SUBCLASS : 5.29.1
1bd0_A_253 - AR => SUBCLASS : 1.1.1
1bd0_A_245 - AR => SUBCLASS : 1.2.13
1bd0_A_253 - AR => SUBCLASS : 3.3.1
1bd0_A_269 - AR => SUBCLASS : 4.3.2
1bd0_A_342 - HH => SUBCLASS : 3.1.1
1bd0_A_342 - HH => SUBCLASS : 3.4.1
1bd0_A_296 - HA => SUBCLASS : 2.1.1
1bd0_A_366 - HA => SUBCLASS : 2.1.2

Loops not clustered in ArchDB

1bd0_A_217 - AR
1bd0_A_275 - AR
1bd0_A_315 - AR
1bd0_A_198 - EH
1bd0_A_158 - EH
1bd0_A_124 - EH
1bd0_A_33 - EH
1bd0_A_8 - EH
1bd0_A_328 - HA
1bd0_A_302 - HA
1bd0_A_262 - HA
1bd0_A_355 - HE
1bd0_A_204 - HE
1bd0_A_176 - HE
1bd0_A_142 - HE
1bd0_A_108 - HE
1bd0_A_93 - HE
1bd0_A_67 - HE
1bd0_A_47 - HE
1bd0_A_14 - HE
1bd0_A_39 - HH

1bd0 A - percentage of sequence identity: 100
1bd0 B - percentage of sequence identity: 100
1epv A - percentage of sequence identity: 99
1epv B - percentage of sequence identity: 99
1ftx A - percentage of sequence identity: 99
1ftx B - percentage of sequence identity: 99
1l6f A - percentage of sequence identity: 99
1l6f B - percentage of sequence identity: 99
1l6g A - percentage of sequence identity: 99
1l6g B - percentage of sequence identity: 99
1niu A - percentage of sequence identity: 99
1niu B - percentage of sequence identity: 99
1sft A - percentage of sequence identity: 100
1sft B - percentage of sequence identity: 100
1xqk A - percentage of sequence identity: 99
1xqk B - percentage of sequence identity: 99
1xql A - percentage of sequence identity: 99
1xql B - percentage of sequence identity: 99
2sfp A - percentage of sequence identity: 99
2sfp B - percentage of sequence identity: 99