PDB: 1d1j Compound: profilin ii Classification: CONTRACTILE PROTEIN Entry date in PDB: 1999-12-22 Resolution [Å]: 2.20 R-Factor: 0.216

CHAIN: A SWISS-PROT/TREMBL: P35080    KEYWORD: 3D-structure    Acetylation    Actin-binding    Alternative splicing    Cytoskeleton    Multigene family    SCOP: d.110.1.1 Alpha and beta proteins (a+b)    Profilin-like    Profilin (actin-binding protein)    Profilin (actin-binding protein)    Profilin (actin-binding protein)    Human (Homo sapiens), isoform II GO:  actin cytoskeleton    actin binding    actin cytoskeleton organization and biogenesis    cytoskeleton organization and biogenesis    CHAIN: B SWISS-PROT/TREMBL: P35080    KEYWORD: 3D-structure    Acetylation    Actin-binding    Alternative splicing    Cytoskeleton    Multigene family    SCOP: d.110.1.1 Alpha and beta proteins (a+b)    Profilin-like    Profilin (actin-binding protein)    Profilin (actin-binding protein)    Profilin (actin-binding protein)    Human (Homo sapiens), isoform II GO:  actin cytoskeleton    actin binding    actin cytoskeleton organization and biogenesis    cytoskeleton organization and biogenesis    CHAIN: C SWISS-PROT/TREMBL: P35080    KEYWORD: 3D-structure    Acetylation    Actin-binding    Alternative splicing    Cytoskeleton    Multigene family    SCOP: d.110.1.1 Alpha and beta proteins (a+b)    Profilin-like    Profilin (actin-binding protein)    Profilin (actin-binding protein)    Profilin (actin-binding protein)    Human (Homo sapiens), isoform II GO:  actin cytoskeleton    actin binding    actin cytoskeleton organization and biogenesis    cytoskeleton organization and biogenesis    CHAIN: D SWISS-PROT/TREMBL: P35080    KEYWORD: 3D-structure    Acetylation    Actin-binding    Alternative splicing    Cytoskeleton    Multigene family    SCOP: d.110.1.1 Alpha and beta proteins (a+b)    Profilin-like    Profilin (actin-binding protein)    Profilin (actin-binding protein)    Profilin (actin-binding protein)    Human (Homo sapiens), isoform II GO:  actin cytoskeleton    actin binding    actin cytoskeleton organization and biogenesis    cytoskeleton organization and biogenesis

Image Source: PDB

Loops in ArchDB95 clusters

1d1j_A_44 - HH => SUBCLASS : 3.3.11
1d1j_A_4 - HE => SUBCLASS : 2.4.11
1d1j_A_63 - HA => SUBCLASS : 2.1.6
1d1j_A_99 - HA => SUBCLASS : 2.2.3

Loops not clustered in ArchDB

1d1j_A_30 - EH
1d1j_A_108 - EH
1d1j_A_16 - HA
1d1j_A_68 - HA
1d1j_A_84 - HA
1d1j_A_57 - HE

1awi A - percentage of sequence identity: 62
1awi B - percentage of sequence identity: 62
1cf0 A - percentage of sequence identity: 62
1cf0 B - percentage of sequence identity: 62
1cjf A - percentage of sequence identity: 62
1cjf B - percentage of sequence identity: 62
1d1j A - percentage of sequence identity: 100
1d1j B - percentage of sequence identity: 100
1d1j C - percentage of sequence identity: 100
1d1j D - percentage of sequence identity: 100
1fik - - percentage of sequence identity: 62
1fil - - percentage of sequence identity: 62
1hlu P - percentage of sequence identity: 63
1pfl - - percentage of sequence identity: 62
1pne - - percentage of sequence identity: 63
2btf P - percentage of sequence identity: 63